Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AL020996.1-203ENST00000536896 2307 ntBASIC19.28■□□□□ 0.68
TREX1Q9NSU2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TREX1Q9NSU2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
TREX1Q9NSU2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TREX1Q9NSU2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TREX1Q9NSU2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TREX1Q9NSU2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.27■□□□□ 0.68
TREX1Q9NSU2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.27■□□□□ 0.68
TREX1Q9NSU2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.27■□□□□ 0.68
TREX1Q9NSU2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TREX1Q9NSU2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TREX1Q9NSU2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TREX1Q9NSU2 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TREX1Q9NSU2 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TREX1Q9NSU2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.27■□□□□ 0.68
TREX1Q9NSU2 CD99P1-205ENST00000527459 561 ntBASIC19.27■□□□□ 0.68
TREX1Q9NSU2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TREX1Q9NSU2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.27■□□□□ 0.68
TREX1Q9NSU2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TREX1Q9NSU2 IRX1P1-201ENST00000438849 1838 ntBASIC19.27■□□□□ 0.68
TREX1Q9NSU2 AC093503.3-201ENST00000624917 2352 ntBASIC19.27■□□□□ 0.67
TREX1Q9NSU2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TREX1Q9NSU2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.27■□□□□ 0.67
TREX1Q9NSU2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
TREX1Q9NSU2 AC004408.2-201ENST00000623613 2777 ntBASIC19.27■□□□□ 0.67
TREX1Q9NSU2 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TREX1Q9NSU2 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.26■□□□□ 0.67
TREX1Q9NSU2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.26■□□□□ 0.67
TREX1Q9NSU2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TREX1Q9NSU2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TREX1Q9NSU2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TREX1Q9NSU2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TREX1Q9NSU2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.26■□□□□ 0.67
TREX1Q9NSU2 KRT16P5-201ENST00000455284 522 ntBASIC19.26■□□□□ 0.67
TREX1Q9NSU2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TREX1Q9NSU2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TREX1Q9NSU2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.26■□□□□ 0.67
TREX1Q9NSU2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.26■□□□□ 0.67
TREX1Q9NSU2 AC006058.3-201ENST00000606217 1069 ntBASIC19.26■□□□□ 0.67
TREX1Q9NSU2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.26■□□□□ 0.67
TREX1Q9NSU2 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TREX1Q9NSU2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TREX1Q9NSU2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TREX1Q9NSU2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TREX1Q9NSU2 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
TREX1Q9NSU2 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TREX1Q9NSU2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.26■□□□□ 0.67
TREX1Q9NSU2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
TREX1Q9NSU2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TREX1Q9NSU2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TREX1Q9NSU2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
TREX1Q9NSU2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TREX1Q9NSU2 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TREX1Q9NSU2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TREX1Q9NSU2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TREX1Q9NSU2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TREX1Q9NSU2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TREX1Q9NSU2 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.25■□□□□ 0.67
TREX1Q9NSU2 FP475955.4-201ENST00000623131 1990 ntBASIC19.25■□□□□ 0.67
TREX1Q9NSU2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
TREX1Q9NSU2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TREX1Q9NSU2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TREX1Q9NSU2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TREX1Q9NSU2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TREX1Q9NSU2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.25■□□□□ 0.67
TREX1Q9NSU2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TREX1Q9NSU2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TREX1Q9NSU2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.25■□□□□ 0.67
TREX1Q9NSU2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
TREX1Q9NSU2 AL160286.2-201ENST00000567150 934 ntBASIC19.25■□□□□ 0.67
TREX1Q9NSU2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.25■□□□□ 0.67
TREX1Q9NSU2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.25■□□□□ 0.67
TREX1Q9NSU2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.25■□□□□ 0.67
TREX1Q9NSU2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.25■□□□□ 0.67
TREX1Q9NSU2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TREX1Q9NSU2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TREX1Q9NSU2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TREX1Q9NSU2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TREX1Q9NSU2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TREX1Q9NSU2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.24■□□□□ 0.67
TREX1Q9NSU2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TREX1Q9NSU2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.24■□□□□ 0.67
TREX1Q9NSU2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.24■□□□□ 0.67
TREX1Q9NSU2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TREX1Q9NSU2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TREX1Q9NSU2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
TREX1Q9NSU2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TREX1Q9NSU2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TREX1Q9NSU2 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TREX1Q9NSU2 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.24■□□□□ 0.67
TREX1Q9NSU2 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TREX1Q9NSU2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.24■□□□□ 0.67
TREX1Q9NSU2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TREX1Q9NSU2 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.24■□□□□ 0.67
TREX1Q9NSU2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TREX1Q9NSU2 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TREX1Q9NSU2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TREX1Q9NSU2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TREX1Q9NSU2 AC006333.2-201ENST00000607957 2099 ntBASIC19.24■□□□□ 0.67
TREX1Q9NSU2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms