Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.73■□□□□ 0.43
SDHAF3Q9NRP4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SDHAF3Q9NRP4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SDHAF3Q9NRP4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.73■□□□□ 0.43
SDHAF3Q9NRP4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SDHAF3Q9NRP4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SDHAF3Q9NRP4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
SDHAF3Q9NRP4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.73■□□□□ 0.43
SDHAF3Q9NRP4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.73■□□□□ 0.43
SDHAF3Q9NRP4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.73■□□□□ 0.43
SDHAF3Q9NRP4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SDHAF3Q9NRP4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.73■□□□□ 0.43
SDHAF3Q9NRP4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
SDHAF3Q9NRP4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SDHAF3Q9NRP4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SDHAF3Q9NRP4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.73■□□□□ 0.43
SDHAF3Q9NRP4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SDHAF3Q9NRP4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
SDHAF3Q9NRP4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SDHAF3Q9NRP4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SDHAF3Q9NRP4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SDHAF3Q9NRP4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.72■□□□□ 0.43
SDHAF3Q9NRP4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SDHAF3Q9NRP4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SDHAF3Q9NRP4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SDHAF3Q9NRP4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SDHAF3Q9NRP4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SDHAF3Q9NRP4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SDHAF3Q9NRP4 TREX1-205ENST00000625293 1783 ntBASIC17.72■□□□□ 0.43
SDHAF3Q9NRP4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.72■□□□□ 0.43
SDHAF3Q9NRP4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SDHAF3Q9NRP4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SDHAF3Q9NRP4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SDHAF3Q9NRP4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SDHAF3Q9NRP4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SDHAF3Q9NRP4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.72■□□□□ 0.43
SDHAF3Q9NRP4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.72■□□□□ 0.43
SDHAF3Q9NRP4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.72■□□□□ 0.43
SDHAF3Q9NRP4 AC233702.5-201ENST00000584107 538 ntBASIC17.72■□□□□ 0.43
SDHAF3Q9NRP4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.72■□□□□ 0.43
SDHAF3Q9NRP4 AL445675.2-201ENST00000620291 557 ntBASIC17.72■□□□□ 0.43
SDHAF3Q9NRP4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.72■□□□□ 0.43
SDHAF3Q9NRP4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.72■□□□□ 0.43
SDHAF3Q9NRP4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.72■□□□□ 0.43
SDHAF3Q9NRP4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.72■□□□□ 0.43
SDHAF3Q9NRP4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SDHAF3Q9NRP4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SDHAF3Q9NRP4 KRT16P1-201ENST00000399124 1418 ntBASIC17.72■□□□□ 0.43
SDHAF3Q9NRP4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SDHAF3Q9NRP4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SDHAF3Q9NRP4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SDHAF3Q9NRP4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.71■□□□□ 0.43
SDHAF3Q9NRP4 AFG3L1P-217ENST00000557444 2447 ntBASIC17.71■□□□□ 0.43
SDHAF3Q9NRP4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SDHAF3Q9NRP4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SDHAF3Q9NRP4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SDHAF3Q9NRP4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SDHAF3Q9NRP4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.71■□□□□ 0.43
SDHAF3Q9NRP4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SDHAF3Q9NRP4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.71■□□□□ 0.43
SDHAF3Q9NRP4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SDHAF3Q9NRP4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SDHAF3Q9NRP4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SDHAF3Q9NRP4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.71■□□□□ 0.43
SDHAF3Q9NRP4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.71■□□□□ 0.43
SDHAF3Q9NRP4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.71■□□□□ 0.43
SDHAF3Q9NRP4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SDHAF3Q9NRP4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SDHAF3Q9NRP4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
SDHAF3Q9NRP4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.71■□□□□ 0.43
SDHAF3Q9NRP4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SDHAF3Q9NRP4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.71■□□□□ 0.42
SDHAF3Q9NRP4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SDHAF3Q9NRP4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SDHAF3Q9NRP4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.7■□□□□ 0.42
SDHAF3Q9NRP4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SDHAF3Q9NRP4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.7■□□□□ 0.42
SDHAF3Q9NRP4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SDHAF3Q9NRP4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SDHAF3Q9NRP4 RPS2P4-201ENST00000476944 856 ntBASIC17.7■□□□□ 0.42
SDHAF3Q9NRP4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.7■□□□□ 0.42
SDHAF3Q9NRP4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SDHAF3Q9NRP4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SDHAF3Q9NRP4 AL160286.2-201ENST00000567150 934 ntBASIC17.7■□□□□ 0.42
SDHAF3Q9NRP4 CR392000.1-201ENST00000624770 1228 ntBASIC17.7■□□□□ 0.42
SDHAF3Q9NRP4 HLA-A-209ENST00000638375 975 ntBASIC17.7■□□□□ 0.42
SDHAF3Q9NRP4 AL031985.4-201ENST00000642138 673 ntBASIC17.7■□□□□ 0.42
SDHAF3Q9NRP4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.7■□□□□ 0.42
SDHAF3Q9NRP4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SDHAF3Q9NRP4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SDHAF3Q9NRP4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SDHAF3Q9NRP4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.7■□□□□ 0.42
SDHAF3Q9NRP4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SDHAF3Q9NRP4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SDHAF3Q9NRP4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SDHAF3Q9NRP4 ZNF815P-204ENST00000434898 1737 ntBASIC17.69■□□□□ 0.42
SDHAF3Q9NRP4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.69■□□□□ 0.42
SDHAF3Q9NRP4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SDHAF3Q9NRP4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SDHAF3Q9NRP4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms