Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CBX8Q9HC52 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CBX8Q9HC52 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CBX8Q9HC52 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CBX8Q9HC52 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CBX8Q9HC52 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CBX8Q9HC52 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CBX8Q9HC52 NOC2LP2-201ENST00000407594 1944 ntBASIC21.55■■□□□ 1.04
CBX8Q9HC52 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CBX8Q9HC52 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CBX8Q9HC52 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CBX8Q9HC52 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CBX8Q9HC52 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CBX8Q9HC52 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CBX8Q9HC52 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.55■■□□□ 1.04
CBX8Q9HC52 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.55■■□□□ 1.04
CBX8Q9HC52 AC011767.1-201ENST00000617410 1153 ntBASIC21.55■■□□□ 1.04
CBX8Q9HC52 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.55■■□□□ 1.04
CBX8Q9HC52 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CBX8Q9HC52 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CBX8Q9HC52 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CBX8Q9HC52 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CBX8Q9HC52 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CBX8Q9HC52 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CBX8Q9HC52 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CBX8Q9HC52 AC010980.2-201ENST00000587099 1412 ntBASIC21.55■■□□□ 1.04
CBX8Q9HC52 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CBX8Q9HC52 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CBX8Q9HC52 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CBX8Q9HC52 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CBX8Q9HC52 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CBX8Q9HC52 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CBX8Q9HC52 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CBX8Q9HC52 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.54■■□□□ 1.04
CBX8Q9HC52 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.54■■□□□ 1.04
CBX8Q9HC52 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.54■■□□□ 1.04
CBX8Q9HC52 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CBX8Q9HC52 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CBX8Q9HC52 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CBX8Q9HC52 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CBX8Q9HC52 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CBX8Q9HC52 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CBX8Q9HC52 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.54■■□□□ 1.04
CBX8Q9HC52 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CBX8Q9HC52 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.54■■□□□ 1.04
CBX8Q9HC52 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CBX8Q9HC52 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.53■■□□□ 1.04
CBX8Q9HC52 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.53■■□□□ 1.04
CBX8Q9HC52 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CBX8Q9HC52 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.53■■□□□ 1.04
CBX8Q9HC52 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CBX8Q9HC52 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CBX8Q9HC52 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CBX8Q9HC52 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CBX8Q9HC52 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.53■■□□□ 1.04
CBX8Q9HC52 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.53■■□□□ 1.04
CBX8Q9HC52 AC068880.1-201ENST00000507289 2297 ntBASIC21.53■■□□□ 1.04
CBX8Q9HC52 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CBX8Q9HC52 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.53■■□□□ 1.04
CBX8Q9HC52 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CBX8Q9HC52 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CBX8Q9HC52 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.53■■□□□ 1.04
CBX8Q9HC52 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.53■■□□□ 1.04
CBX8Q9HC52 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.53■■□□□ 1.04
CBX8Q9HC52 AC069236.1-201ENST00000604339 616 ntBASIC21.53■■□□□ 1.04
CBX8Q9HC52 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CBX8Q9HC52 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CBX8Q9HC52 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CBX8Q9HC52 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
CBX8Q9HC52 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.53■■□□□ 1.04
CBX8Q9HC52 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CBX8Q9HC52 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.53■■□□□ 1.04
CBX8Q9HC52 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CBX8Q9HC52 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CBX8Q9HC52 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.53■■□□□ 1.04
CBX8Q9HC52 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CBX8Q9HC52 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CBX8Q9HC52 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CBX8Q9HC52 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CBX8Q9HC52 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.52■■□□□ 1.04
CBX8Q9HC52 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CBX8Q9HC52 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CBX8Q9HC52 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CBX8Q9HC52 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CBX8Q9HC52 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CBX8Q9HC52 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CBX8Q9HC52 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CBX8Q9HC52 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.52■■□□□ 1.04
CBX8Q9HC52 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CBX8Q9HC52 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.52■■□□□ 1.04
CBX8Q9HC52 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CBX8Q9HC52 AC137761.2-201ENST00000561729 223 ntBASIC21.52■■□□□ 1.04
CBX8Q9HC52 AC145350.3-201ENST00000569033 163 ntBASIC21.52■■□□□ 1.04
CBX8Q9HC52 BID-214ENST00000617586 542 ntTSL 5 BASIC21.52■■□□□ 1.04
CBX8Q9HC52 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.52■■□□□ 1.04
CBX8Q9HC52 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CBX8Q9HC52 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CBX8Q9HC52 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
CBX8Q9HC52 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CBX8Q9HC52 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms