Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SH2D4AQ9H788 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SH2D4AQ9H788 AC099778.1-201ENST00000568593 1911 ntBASIC22.51■■□□□ 1.19
SH2D4AQ9H788 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.51■■□□□ 1.19
SH2D4AQ9H788 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SH2D4AQ9H788 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
SH2D4AQ9H788 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SH2D4AQ9H788 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC22.5■■□□□ 1.19
SH2D4AQ9H788 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SH2D4AQ9H788 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SH2D4AQ9H788 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SH2D4AQ9H788 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SH2D4AQ9H788 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC22.5■■□□□ 1.19
SH2D4AQ9H788 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC22.5■■□□□ 1.19
SH2D4AQ9H788 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
SH2D4AQ9H788 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC22.5■■□□□ 1.19
SH2D4AQ9H788 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SH2D4AQ9H788 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SH2D4AQ9H788 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SH2D4AQ9H788 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC22.5■■□□□ 1.19
SH2D4AQ9H788 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.5■■□□□ 1.19
SH2D4AQ9H788 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
SH2D4AQ9H788 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
SH2D4AQ9H788 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC22.5■■□□□ 1.19
SH2D4AQ9H788 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
SH2D4AQ9H788 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SH2D4AQ9H788 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SH2D4AQ9H788 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
SH2D4AQ9H788 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SH2D4AQ9H788 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC22.49■■□□□ 1.19
SH2D4AQ9H788 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC22.49■■□□□ 1.19
SH2D4AQ9H788 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SH2D4AQ9H788 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
SH2D4AQ9H788 GXYLT1P6-201ENST00000456472 1187 ntBASIC22.49■■□□□ 1.19
SH2D4AQ9H788 PRSS44-201ENST00000515154 1146 ntBASIC22.49■■□□□ 1.19
SH2D4AQ9H788 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC22.49■■□□□ 1.19
SH2D4AQ9H788 LTBR-211ENST00000543190 785 ntTSL 3 BASIC22.49■■□□□ 1.19
SH2D4AQ9H788 AL353719.1-201ENST00000566847 864 ntBASIC22.49■■□□□ 1.19
SH2D4AQ9H788 AC006011.2-201ENST00000621313 1158 ntBASIC22.49■■□□□ 1.19
SH2D4AQ9H788 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
SH2D4AQ9H788 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
SH2D4AQ9H788 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SH2D4AQ9H788 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SH2D4AQ9H788 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC22.49■■□□□ 1.19
SH2D4AQ9H788 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SH2D4AQ9H788 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SH2D4AQ9H788 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SH2D4AQ9H788 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC22.49■■□□□ 1.19
SH2D4AQ9H788 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
SH2D4AQ9H788 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
SH2D4AQ9H788 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
SH2D4AQ9H788 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
SH2D4AQ9H788 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SH2D4AQ9H788 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC22.48■■□□□ 1.19
SH2D4AQ9H788 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SH2D4AQ9H788 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC22.48■■□□□ 1.19
SH2D4AQ9H788 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SH2D4AQ9H788 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SH2D4AQ9H788 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SH2D4AQ9H788 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SH2D4AQ9H788 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC22.48■■□□□ 1.19
SH2D4AQ9H788 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SH2D4AQ9H788 TPM1-226ENST00000560959 925 ntTSL 2 BASIC22.48■■□□□ 1.19
SH2D4AQ9H788 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC22.48■■□□□ 1.19
SH2D4AQ9H788 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SH2D4AQ9H788 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SH2D4AQ9H788 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SH2D4AQ9H788 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
SH2D4AQ9H788 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SH2D4AQ9H788 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC22.48■■□□□ 1.19
SH2D4AQ9H788 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.48■■□□□ 1.19
SH2D4AQ9H788 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
SH2D4AQ9H788 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SH2D4AQ9H788 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC22.48■■□□□ 1.19
SH2D4AQ9H788 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
SH2D4AQ9H788 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
SH2D4AQ9H788 AC092667.1-201ENST00000434301 2586 ntBASIC22.47■■□□□ 1.19
SH2D4AQ9H788 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC22.47■■□□□ 1.19
SH2D4AQ9H788 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SH2D4AQ9H788 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SH2D4AQ9H788 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SH2D4AQ9H788 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
SH2D4AQ9H788 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC22.47■■□□□ 1.19
SH2D4AQ9H788 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC22.47■■□□□ 1.19
SH2D4AQ9H788 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC22.47■■□□□ 1.19
SH2D4AQ9H788 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC22.47■■□□□ 1.19
SH2D4AQ9H788 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
SH2D4AQ9H788 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC22.47■■□□□ 1.19
SH2D4AQ9H788 LINC01238-205ENST00000567549 1107 ntBASIC22.47■■□□□ 1.19
SH2D4AQ9H788 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC22.47■■□□□ 1.19
SH2D4AQ9H788 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC22.47■■□□□ 1.19
SH2D4AQ9H788 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SH2D4AQ9H788 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SH2D4AQ9H788 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC22.47■■□□□ 1.19
SH2D4AQ9H788 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SH2D4AQ9H788 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SH2D4AQ9H788 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SH2D4AQ9H788 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SH2D4AQ9H788 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
SH2D4AQ9H788 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms