Protein–RNA interactions for Protein: Q9BY11

PACSIN1, Protein kinase C and casein kinase substrate in neurons protein 1, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1Q9BY11 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PACSIN1Q9BY11 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PACSIN1Q9BY11 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PACSIN1Q9BY11 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PACSIN1Q9BY11 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PACSIN1Q9BY11 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 YBX1P10-201ENST00000444752 975 ntBASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 AC097658.1-201ENST00000475555 843 ntBASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 AL121906.2-201ENST00000621597 723 ntBASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 AC009113.1-201ENST00000570267 2443 ntBASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PACSIN1Q9BY11 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PACSIN1Q9BY11 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PACSIN1Q9BY11 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
PACSIN1Q9BY11 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.52■□□□□ 0.88
PACSIN1Q9BY11 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PACSIN1Q9BY11 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.52■□□□□ 0.88
PACSIN1Q9BY11 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PACSIN1Q9BY11 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PACSIN1Q9BY11 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.52■□□□□ 0.88
PACSIN1Q9BY11 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.52■□□□□ 0.88
PACSIN1Q9BY11 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PACSIN1Q9BY11 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PACSIN1Q9BY11 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.52■□□□□ 0.88
PACSIN1Q9BY11 AC007613.1-201ENST00000572811 2597 ntBASIC20.52■□□□□ 0.88
PACSIN1Q9BY11 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PACSIN1Q9BY11 IRX1P1-201ENST00000438849 1838 ntBASIC20.52■□□□□ 0.88
PACSIN1Q9BY11 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PACSIN1Q9BY11 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PACSIN1Q9BY11 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PACSIN1Q9BY11 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PACSIN1Q9BY11 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PACSIN1Q9BY11 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PACSIN1Q9BY11 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
PACSIN1Q9BY11 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PACSIN1Q9BY11 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PACSIN1Q9BY11 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PACSIN1Q9BY11 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PACSIN1Q9BY11 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PACSIN1Q9BY11 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PACSIN1Q9BY11 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PACSIN1Q9BY11 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.51■□□□□ 0.87
PACSIN1Q9BY11 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PACSIN1Q9BY11 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PACSIN1Q9BY11 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.51■□□□□ 0.87
PACSIN1Q9BY11 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.51■□□□□ 0.87
PACSIN1Q9BY11 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.51■□□□□ 0.87
PACSIN1Q9BY11 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.51■□□□□ 0.87
PACSIN1Q9BY11 AC060766.5-201ENST00000590539 871 ntBASIC20.51■□□□□ 0.87
PACSIN1Q9BY11 AC120498.8-201ENST00000614275 531 ntBASIC20.51■□□□□ 0.87
PACSIN1Q9BY11 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.51■□□□□ 0.87
PACSIN1Q9BY11 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.51■□□□□ 0.87
PACSIN1Q9BY11 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PACSIN1Q9BY11 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PACSIN1Q9BY11 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PACSIN1Q9BY11 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.5■□□□□ 0.87
PACSIN1Q9BY11 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PACSIN1Q9BY11 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
PACSIN1Q9BY11 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PACSIN1Q9BY11 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PACSIN1Q9BY11 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.5■□□□□ 0.87
PACSIN1Q9BY11 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.5■□□□□ 0.87
PACSIN1Q9BY11 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.5■□□□□ 0.87
PACSIN1Q9BY11 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.5■□□□□ 0.87
PACSIN1Q9BY11 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.5■□□□□ 0.87
PACSIN1Q9BY11 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.5■□□□□ 0.87
PACSIN1Q9BY11 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.5■□□□□ 0.87
PACSIN1Q9BY11 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.5■□□□□ 0.87
PACSIN1Q9BY11 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.5■□□□□ 0.87
PACSIN1Q9BY11 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PACSIN1Q9BY11 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PACSIN1Q9BY11 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PACSIN1Q9BY11 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.5■□□□□ 0.87
PACSIN1Q9BY11 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.5■□□□□ 0.87
PACSIN1Q9BY11 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms