Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
HAPLN3Q96S86 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HAPLN3Q96S86 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20■□□□□ 0.79
HAPLN3Q96S86 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
HAPLN3Q96S86 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HAPLN3Q96S86 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
HAPLN3Q96S86 FAM197Y1-201ENST00000421178 764 ntBASIC20■□□□□ 0.79
HAPLN3Q96S86 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
HAPLN3Q96S86 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20■□□□□ 0.79
HAPLN3Q96S86 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20■□□□□ 0.79
HAPLN3Q96S86 AL031985.4-201ENST00000642138 673 ntBASIC20■□□□□ 0.79
HAPLN3Q96S86 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HAPLN3Q96S86 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
HAPLN3Q96S86 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20■□□□□ 0.79
HAPLN3Q96S86 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 AC026271.3-201ENST00000571884 352 ntBASIC19.99■□□□□ 0.79
HAPLN3Q96S86 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 LINC01465-201ENST00000408887 1940 ntBASIC19.99■□□□□ 0.79
HAPLN3Q96S86 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.99■□□□□ 0.79
HAPLN3Q96S86 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HAPLN3Q96S86 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HAPLN3Q96S86 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.98■□□□□ 0.79
HAPLN3Q96S86 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HAPLN3Q96S86 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.98■□□□□ 0.79
HAPLN3Q96S86 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
HAPLN3Q96S86 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HAPLN3Q96S86 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HAPLN3Q96S86 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HAPLN3Q96S86 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HAPLN3Q96S86 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
HAPLN3Q96S86 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HAPLN3Q96S86 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.98■□□□□ 0.79
HAPLN3Q96S86 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.98■□□□□ 0.79
HAPLN3Q96S86 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.98■□□□□ 0.79
HAPLN3Q96S86 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.98■□□□□ 0.79
HAPLN3Q96S86 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.98■□□□□ 0.79
HAPLN3Q96S86 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.98■□□□□ 0.79
HAPLN3Q96S86 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HAPLN3Q96S86 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
HAPLN3Q96S86 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HAPLN3Q96S86 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
HAPLN3Q96S86 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
HAPLN3Q96S86 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HAPLN3Q96S86 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.98■□□□□ 0.79
HAPLN3Q96S86 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
HAPLN3Q96S86 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.97■□□□□ 0.79
HAPLN3Q96S86 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HAPLN3Q96S86 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HAPLN3Q96S86 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HAPLN3Q96S86 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HAPLN3Q96S86 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HAPLN3Q96S86 AC093484.2-201ENST00000580996 2166 ntBASIC19.97■□□□□ 0.79
HAPLN3Q96S86 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HAPLN3Q96S86 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
HAPLN3Q96S86 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HAPLN3Q96S86 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HAPLN3Q96S86 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.97■□□□□ 0.79
HAPLN3Q96S86 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HAPLN3Q96S86 Z85996.1-201ENST00000494644 937 ntBASIC19.97■□□□□ 0.79
HAPLN3Q96S86 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HAPLN3Q96S86 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.97■□□□□ 0.79
HAPLN3Q96S86 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.97■□□□□ 0.79
HAPLN3Q96S86 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
HAPLN3Q96S86 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms