Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.01□□□□□ -0.01
DUX3Q96PT4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
DUX3Q96PT4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
DUX3Q96PT4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.01□□□□□ -0.01
DUX3Q96PT4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.01□□□□□ -0.01
DUX3Q96PT4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.01□□□□□ -0.01
DUX3Q96PT4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
DUX3Q96PT4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
DUX3Q96PT4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.01□□□□□ -0.01
DUX3Q96PT4 AL445675.2-201ENST00000620291 557 ntBASIC15.01□□□□□ -0.01
DUX3Q96PT4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.01□□□□□ -0.01
DUX3Q96PT4 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.01□□□□□ -0.01
DUX3Q96PT4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
DUX3Q96PT4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
DUX3Q96PT4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
DUX3Q96PT4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
DUX3Q96PT4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
DUX3Q96PT4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
DUX3Q96PT4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
DUX3Q96PT4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.01□□□□□ -0.01
DUX3Q96PT4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
DUX3Q96PT4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15□□□□□ -0.01
DUX3Q96PT4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
DUX3Q96PT4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
DUX3Q96PT4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
DUX3Q96PT4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
DUX3Q96PT4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
DUX3Q96PT4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
DUX3Q96PT4 BCL2-203ENST00000589955 5011 ntBASIC15□□□□□ -0.01
DUX3Q96PT4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
DUX3Q96PT4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
DUX3Q96PT4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
DUX3Q96PT4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
DUX3Q96PT4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15□□□□□ -0.01
DUX3Q96PT4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15□□□□□ -0.01
DUX3Q96PT4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC15□□□□□ -0.01
DUX3Q96PT4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
DUX3Q96PT4 AP001271.2-201ENST00000624018 1556 ntBASIC15□□□□□ -0.01
DUX3Q96PT4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
DUX3Q96PT4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
DUX3Q96PT4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
DUX3Q96PT4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15□□□□□ -0.01
DUX3Q96PT4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15□□□□□ -0.01
DUX3Q96PT4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15□□□□□ -0.01
DUX3Q96PT4 AC004980.1-204ENST00000429707 299 ntBASIC15□□□□□ -0.01
DUX3Q96PT4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15□□□□□ -0.01
DUX3Q96PT4 PPP1R14BP5-201ENST00000440334 435 ntBASIC15□□□□□ -0.01
DUX3Q96PT4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15□□□□□ -0.01
DUX3Q96PT4 FAM210CP-201ENST00000445714 574 ntBASIC15□□□□□ -0.01
DUX3Q96PT4 AC011506.1-201ENST00000474329 610 ntBASIC15□□□□□ -0.01
DUX3Q96PT4 AC116562.2-201ENST00000507042 360 ntBASIC15□□□□□ -0.01
DUX3Q96PT4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15□□□□□ -0.01
DUX3Q96PT4 HLA-A-209ENST00000638375 975 ntBASIC15□□□□□ -0.01
DUX3Q96PT4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15□□□□□ -0.01
DUX3Q96PT4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15□□□□□ -0.01
DUX3Q96PT4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15□□□□□ -0.01
DUX3Q96PT4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
DUX3Q96PT4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
DUX3Q96PT4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC15□□□□□ -0.01
DUX3Q96PT4 CYP2D8P-201ENST00000433633 1490 ntBASIC15□□□□□ -0.01
DUX3Q96PT4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
DUX3Q96PT4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15□□□□□ -0.01
DUX3Q96PT4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC15□□□□□ -0.01
DUX3Q96PT4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
DUX3Q96PT4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15□□□□□ -0.01
DUX3Q96PT4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
DUX3Q96PT4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
DUX3Q96PT4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
DUX3Q96PT4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC14.99□□□□□ -0.01
DUX3Q96PT4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
DUX3Q96PT4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
DUX3Q96PT4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.99□□□□□ -0.01
DUX3Q96PT4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
DUX3Q96PT4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
DUX3Q96PT4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.99□□□□□ -0.01
DUX3Q96PT4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
DUX3Q96PT4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
DUX3Q96PT4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
DUX3Q96PT4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.99□□□□□ -0.01
DUX3Q96PT4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC14.99□□□□□ -0.01
DUX3Q96PT4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
DUX3Q96PT4 AC131212.4-201ENST00000623606 975 ntBASIC14.99□□□□□ -0.01
DUX3Q96PT4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
DUX3Q96PT4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
DUX3Q96PT4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
DUX3Q96PT4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
DUX3Q96PT4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
DUX3Q96PT4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC14.99□□□□□ -0.01
DUX3Q96PT4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC14.99□□□□□ -0.01
DUX3Q96PT4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
DUX3Q96PT4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
DUX3Q96PT4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
DUX3Q96PT4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
DUX3Q96PT4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
DUX3Q96PT4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
DUX3Q96PT4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.98□□□□□ -0.01
DUX3Q96PT4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
DUX3Q96PT4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
DUX3Q96PT4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
DUX3Q96PT4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms