Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC46A1Q96NT5 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC46A1Q96NT5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SLC46A1Q96NT5 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
SLC46A1Q96NT5 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SLC46A1Q96NT5 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SLC46A1Q96NT5 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC46A1Q96NT5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC46A1Q96NT5 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC46A1Q96NT5 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC46A1Q96NT5 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC46A1Q96NT5 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC46A1Q96NT5 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.48■□□□□ 0.55
SLC46A1Q96NT5 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SLC46A1Q96NT5 HOMER2P1-201ENST00000455653 964 ntBASIC18.48■□□□□ 0.55
SLC46A1Q96NT5 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.48■□□□□ 0.55
SLC46A1Q96NT5 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
SLC46A1Q96NT5 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC46A1Q96NT5 AL353719.1-201ENST00000566847 864 ntBASIC18.48■□□□□ 0.55
SLC46A1Q96NT5 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.48■□□□□ 0.55
SLC46A1Q96NT5 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
SLC46A1Q96NT5 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SLC46A1Q96NT5 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC46A1Q96NT5 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC46A1Q96NT5 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC46A1Q96NT5 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC46A1Q96NT5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 KRT18P48-201ENST00000434763 852 ntBASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC46A1Q96NT5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC46A1Q96NT5 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC46A1Q96NT5 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC46A1Q96NT5 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC46A1Q96NT5 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC46A1Q96NT5 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC46A1Q96NT5 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC46A1Q96NT5 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC46A1Q96NT5 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC46A1Q96NT5 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC46A1Q96NT5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC46A1Q96NT5 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC46A1Q96NT5 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.46■□□□□ 0.55
SLC46A1Q96NT5 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.46■□□□□ 0.55
SLC46A1Q96NT5 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC46A1Q96NT5 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC46A1Q96NT5 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC46A1Q96NT5 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC46A1Q96NT5 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.46■□□□□ 0.55
SLC46A1Q96NT5 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.46■□□□□ 0.55
SLC46A1Q96NT5 AL121894.2-201ENST00000602977 491 ntBASIC18.46■□□□□ 0.55
SLC46A1Q96NT5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC46A1Q96NT5 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC46A1Q96NT5 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC46A1Q96NT5 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SLC46A1Q96NT5 AL391422.3-201ENST00000603791 2761 ntBASIC18.46■□□□□ 0.55
SLC46A1Q96NT5 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC46A1Q96NT5 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC46A1Q96NT5 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.45■□□□□ 0.54
SLC46A1Q96NT5 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC46A1Q96NT5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.45■□□□□ 0.54
SLC46A1Q96NT5 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.45■□□□□ 0.54
SLC46A1Q96NT5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC46A1Q96NT5 IER3-202ENST00000376377 1350 ntBASIC18.45■□□□□ 0.54
SLC46A1Q96NT5 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC46A1Q96NT5 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC46A1Q96NT5 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC46A1Q96NT5 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC46A1Q96NT5 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC46A1Q96NT5 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC46A1Q96NT5 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
SLC46A1Q96NT5 Z85996.1-201ENST00000494644 937 ntBASIC18.45■□□□□ 0.54
SLC46A1Q96NT5 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms