Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 ID1-201ENST00000376105 1233 ntBASIC20.41■□□□□ 0.86
TRIM11Q96F44 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM11Q96F44 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.41■□□□□ 0.86
TRIM11Q96F44 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM11Q96F44 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.41■□□□□ 0.86
TRIM11Q96F44 AP003097.1-201ENST00000530657 1135 ntBASIC20.41■□□□□ 0.86
TRIM11Q96F44 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.41■□□□□ 0.86
TRIM11Q96F44 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM11Q96F44 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM11Q96F44 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM11Q96F44 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TRIM11Q96F44 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM11Q96F44 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM11Q96F44 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM11Q96F44 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM11Q96F44 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
TRIM11Q96F44 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM11Q96F44 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM11Q96F44 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM11Q96F44 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM11Q96F44 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
TRIM11Q96F44 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM11Q96F44 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM11Q96F44 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM11Q96F44 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM11Q96F44 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
TRIM11Q96F44 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
TRIM11Q96F44 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TRIM11Q96F44 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM11Q96F44 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM11Q96F44 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM11Q96F44 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM11Q96F44 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM11Q96F44 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM11Q96F44 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM11Q96F44 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
TRIM11Q96F44 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM11Q96F44 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.4■□□□□ 0.86
TRIM11Q96F44 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM11Q96F44 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.4■□□□□ 0.86
TRIM11Q96F44 NBPF21P-201ENST00000425093 1451 ntBASIC20.4■□□□□ 0.86
TRIM11Q96F44 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM11Q96F44 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.4■□□□□ 0.86
TRIM11Q96F44 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM11Q96F44 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.4■□□□□ 0.86
TRIM11Q96F44 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.4■□□□□ 0.86
TRIM11Q96F44 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM11Q96F44 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM11Q96F44 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM11Q96F44 AC008403.3-201ENST00000598924 454 ntBASIC20.4■□□□□ 0.86
TRIM11Q96F44 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.4■□□□□ 0.86
TRIM11Q96F44 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TRIM11Q96F44 AC004264.1-201ENST00000608354 794 ntBASIC20.4■□□□□ 0.86
TRIM11Q96F44 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TRIM11Q96F44 AC120498.9-201ENST00000339021 3867 ntBASIC20.4■□□□□ 0.86
TRIM11Q96F44 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.39■□□□□ 0.86
TRIM11Q96F44 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM11Q96F44 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM11Q96F44 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM11Q96F44 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM11Q96F44 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
TRIM11Q96F44 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.39■□□□□ 0.85
TRIM11Q96F44 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
TRIM11Q96F44 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM11Q96F44 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM11Q96F44 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TRIM11Q96F44 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM11Q96F44 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
TRIM11Q96F44 KRT17P3-201ENST00000420566 1262 ntBASIC20.39■□□□□ 0.85
TRIM11Q96F44 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.39■□□□□ 0.85
TRIM11Q96F44 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM11Q96F44 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM11Q96F44 RNA5SP413-201ENST00000516373 109 ntBASIC20.39■□□□□ 0.85
TRIM11Q96F44 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.39■□□□□ 0.85
TRIM11Q96F44 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.39■□□□□ 0.85
TRIM11Q96F44 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM11Q96F44 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM11Q96F44 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM11Q96F44 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM11Q96F44 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM11Q96F44 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM11Q96F44 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM11Q96F44 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM11Q96F44 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM11Q96F44 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM11Q96F44 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
TRIM11Q96F44 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
TRIM11Q96F44 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM11Q96F44 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.38■□□□□ 0.85
TRIM11Q96F44 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM11Q96F44 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TRIM11Q96F44 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM11Q96F44 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.38■□□□□ 0.85
TRIM11Q96F44 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM11Q96F44 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM11Q96F44 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM11Q96F44 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM11Q96F44 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM11Q96F44 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM11Q96F44 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms