Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.06■□□□□ 0.16
C11orf42Q8N5U0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
C11orf42Q8N5U0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
C11orf42Q8N5U0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.06■□□□□ 0.16
C11orf42Q8N5U0 UBE2SP1-201ENST00000450587 669 ntBASIC16.06■□□□□ 0.16
C11orf42Q8N5U0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.06■□□□□ 0.16
C11orf42Q8N5U0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.06■□□□□ 0.16
C11orf42Q8N5U0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.06■□□□□ 0.16
C11orf42Q8N5U0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
C11orf42Q8N5U0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
C11orf42Q8N5U0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C11orf42Q8N5U0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
C11orf42Q8N5U0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
C11orf42Q8N5U0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
C11orf42Q8N5U0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 AC004264.1-201ENST00000608354 794 ntBASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 FAM197Y4-202ENST00000622692 608 ntBASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 TREX1-205ENST00000625293 1783 ntBASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf42Q8N5U0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C11orf42Q8N5U0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms