Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATPAF2Q8N5M1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.8■□□□□ 0.76
ATPAF2Q8N5M1 AL032819.2-201ENST00000624543 2162 ntBASIC19.8■□□□□ 0.76
ATPAF2Q8N5M1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATPAF2Q8N5M1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATPAF2Q8N5M1 AP002982.1-201ENST00000492365 877 ntBASIC19.8■□□□□ 0.76
ATPAF2Q8N5M1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.8■□□□□ 0.76
ATPAF2Q8N5M1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.8■□□□□ 0.76
ATPAF2Q8N5M1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.8■□□□□ 0.76
ATPAF2Q8N5M1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.8■□□□□ 0.76
ATPAF2Q8N5M1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
ATPAF2Q8N5M1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATPAF2Q8N5M1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.8■□□□□ 0.76
ATPAF2Q8N5M1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATPAF2Q8N5M1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.8■□□□□ 0.76
ATPAF2Q8N5M1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.79■□□□□ 0.76
ATPAF2Q8N5M1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATPAF2Q8N5M1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.79■□□□□ 0.76
ATPAF2Q8N5M1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
ATPAF2Q8N5M1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
ATPAF2Q8N5M1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATPAF2Q8N5M1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.79■□□□□ 0.76
ATPAF2Q8N5M1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATPAF2Q8N5M1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ATPAF2Q8N5M1 LINC01465-201ENST00000408887 1940 ntBASIC19.79■□□□□ 0.76
ATPAF2Q8N5M1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATPAF2Q8N5M1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATPAF2Q8N5M1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATPAF2Q8N5M1 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATPAF2Q8N5M1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.79■□□□□ 0.76
ATPAF2Q8N5M1 AL353807.1-201ENST00000427475 662 ntBASIC19.79■□□□□ 0.76
ATPAF2Q8N5M1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
ATPAF2Q8N5M1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ATPAF2Q8N5M1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.79■□□□□ 0.76
ATPAF2Q8N5M1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATPAF2Q8N5M1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATPAF2Q8N5M1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATPAF2Q8N5M1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
ATPAF2Q8N5M1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATPAF2Q8N5M1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATPAF2Q8N5M1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.78■□□□□ 0.76
ATPAF2Q8N5M1 SDHAP1-207ENST00000440850 2000 ntBASIC19.78■□□□□ 0.76
ATPAF2Q8N5M1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATPAF2Q8N5M1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATPAF2Q8N5M1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.78■□□□□ 0.76
ATPAF2Q8N5M1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATPAF2Q8N5M1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATPAF2Q8N5M1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATPAF2Q8N5M1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.78■□□□□ 0.76
ATPAF2Q8N5M1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.78■□□□□ 0.76
ATPAF2Q8N5M1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATPAF2Q8N5M1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATPAF2Q8N5M1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.78■□□□□ 0.76
ATPAF2Q8N5M1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.78■□□□□ 0.76
ATPAF2Q8N5M1 RARRES2P10-201ENST00000564312 460 ntBASIC19.78■□□□□ 0.76
ATPAF2Q8N5M1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.78■□□□□ 0.76
ATPAF2Q8N5M1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.78■□□□□ 0.76
ATPAF2Q8N5M1 TMEM191A-211ENST00000637163 1067 ntBASIC19.78■□□□□ 0.76
ATPAF2Q8N5M1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
ATPAF2Q8N5M1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATPAF2Q8N5M1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.78■□□□□ 0.76
ATPAF2Q8N5M1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.78■□□□□ 0.76
ATPAF2Q8N5M1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
ATPAF2Q8N5M1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.78■□□□□ 0.76
ATPAF2Q8N5M1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.78■□□□□ 0.76
ATPAF2Q8N5M1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATPAF2Q8N5M1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ATPAF2Q8N5M1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ATPAF2Q8N5M1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATPAF2Q8N5M1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATPAF2Q8N5M1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATPAF2Q8N5M1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATPAF2Q8N5M1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATPAF2Q8N5M1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.77■□□□□ 0.76
ATPAF2Q8N5M1 NIFKP9-201ENST00000419265 221 ntBASIC19.77■□□□□ 0.76
ATPAF2Q8N5M1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ATPAF2Q8N5M1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.77■□□□□ 0.76
ATPAF2Q8N5M1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ATPAF2Q8N5M1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.77■□□□□ 0.76
ATPAF2Q8N5M1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.77■□□□□ 0.76
ATPAF2Q8N5M1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.77■□□□□ 0.76
ATPAF2Q8N5M1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATPAF2Q8N5M1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
ATPAF2Q8N5M1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATPAF2Q8N5M1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ATPAF2Q8N5M1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ATPAF2Q8N5M1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.77■□□□□ 0.75
ATPAF2Q8N5M1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
ATPAF2Q8N5M1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.76■□□□□ 0.75
ATPAF2Q8N5M1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.76■□□□□ 0.75
ATPAF2Q8N5M1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
ATPAF2Q8N5M1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATPAF2Q8N5M1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.76■□□□□ 0.75
ATPAF2Q8N5M1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.76■□□□□ 0.75
ATPAF2Q8N5M1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
ATPAF2Q8N5M1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.76■□□□□ 0.75
ATPAF2Q8N5M1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATPAF2Q8N5M1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATPAF2Q8N5M1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATPAF2Q8N5M1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms