Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPOQ8N3V7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPOQ8N3V7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.63■□□□□ 0.73
SYNPOQ8N3V7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPOQ8N3V7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.63■□□□□ 0.73
SYNPOQ8N3V7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.63■□□□□ 0.73
SYNPOQ8N3V7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SYNPOQ8N3V7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
SYNPOQ8N3V7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SYNPOQ8N3V7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPOQ8N3V7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPOQ8N3V7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.63■□□□□ 0.73
SYNPOQ8N3V7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.63■□□□□ 0.73
SYNPOQ8N3V7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPOQ8N3V7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
SYNPOQ8N3V7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPOQ8N3V7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPOQ8N3V7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPOQ8N3V7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPOQ8N3V7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPOQ8N3V7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SYNPOQ8N3V7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SYNPOQ8N3V7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SYNPOQ8N3V7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPOQ8N3V7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPOQ8N3V7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPOQ8N3V7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPOQ8N3V7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.62■□□□□ 0.73
SYNPOQ8N3V7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPOQ8N3V7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SYNPOQ8N3V7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPOQ8N3V7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.62■□□□□ 0.73
SYNPOQ8N3V7 PRSS44-201ENST00000515154 1146 ntBASIC19.62■□□□□ 0.73
SYNPOQ8N3V7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPOQ8N3V7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.62■□□□□ 0.73
SYNPOQ8N3V7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.62■□□□□ 0.73
SYNPOQ8N3V7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPOQ8N3V7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPOQ8N3V7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYNPOQ8N3V7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 AC092667.1-201ENST00000434301 2586 ntBASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 AP005212.1-201ENST00000581547 1997 ntBASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 GABARAPL3-202ENST00000624044 1851 ntBASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 AL441883.1-201ENST00000566170 1045 ntBASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 AC116407.4-201ENST00000623319 1061 ntBASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SYNPOQ8N3V7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYNPOQ8N3V7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.6■□□□□ 0.73
SYNPOQ8N3V7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SYNPOQ8N3V7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYNPOQ8N3V7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
SYNPOQ8N3V7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.6■□□□□ 0.73
SYNPOQ8N3V7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.6■□□□□ 0.73
SYNPOQ8N3V7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYNPOQ8N3V7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.6■□□□□ 0.73
SYNPOQ8N3V7 AP003041.3-201ENST00000527151 707 ntBASIC19.6■□□□□ 0.73
SYNPOQ8N3V7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.6■□□□□ 0.73
SYNPOQ8N3V7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
SYNPOQ8N3V7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.6■□□□□ 0.73
SYNPOQ8N3V7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SYNPOQ8N3V7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SYNPOQ8N3V7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYNPOQ8N3V7 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYNPOQ8N3V7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SYNPOQ8N3V7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms