Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.43■■□□□ 1.02
CCDC65Q8IXS2 RPPH1-201ENST00000516869 333 ntBASIC21.43■■□□□ 1.02
CCDC65Q8IXS2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.43■■□□□ 1.02
CCDC65Q8IXS2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.43■■□□□ 1.02
CCDC65Q8IXS2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.43■■□□□ 1.02
CCDC65Q8IXS2 HLA-A-209ENST00000638375 975 ntBASIC21.43■■□□□ 1.02
CCDC65Q8IXS2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC65Q8IXS2 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC65Q8IXS2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.43■■□□□ 1.02
CCDC65Q8IXS2 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC65Q8IXS2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.43■■□□□ 1.02
CCDC65Q8IXS2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC65Q8IXS2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.43■■□□□ 1.02
CCDC65Q8IXS2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.43■■□□□ 1.02
CCDC65Q8IXS2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.43■■□□□ 1.02
CCDC65Q8IXS2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.43■■□□□ 1.02
CCDC65Q8IXS2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.43■■□□□ 1.02
CCDC65Q8IXS2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.43■■□□□ 1.02
CCDC65Q8IXS2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CCDC65Q8IXS2 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC65Q8IXS2 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC65Q8IXS2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC65Q8IXS2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC65Q8IXS2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC65Q8IXS2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.42■■□□□ 1.02
CCDC65Q8IXS2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.42■■□□□ 1.02
CCDC65Q8IXS2 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC65Q8IXS2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.42■■□□□ 1.02
CCDC65Q8IXS2 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.42■■□□□ 1.02
CCDC65Q8IXS2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC65Q8IXS2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.42■■□□□ 1.02
CCDC65Q8IXS2 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.42■■□□□ 1.02
CCDC65Q8IXS2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.42■■□□□ 1.02
CCDC65Q8IXS2 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CCDC65Q8IXS2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CCDC65Q8IXS2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC65Q8IXS2 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC65Q8IXS2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.41■■□□□ 1.02
CCDC65Q8IXS2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC65Q8IXS2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC65Q8IXS2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC65Q8IXS2 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CCDC65Q8IXS2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CCDC65Q8IXS2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
CCDC65Q8IXS2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.41■■□□□ 1.02
CCDC65Q8IXS2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC65Q8IXS2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CCDC65Q8IXS2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.41■■□□□ 1.02
CCDC65Q8IXS2 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC65Q8IXS2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.41■■□□□ 1.02
CCDC65Q8IXS2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.41■■□□□ 1.02
CCDC65Q8IXS2 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.41■■□□□ 1.02
CCDC65Q8IXS2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC65Q8IXS2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC65Q8IXS2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
CCDC65Q8IXS2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC65Q8IXS2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CCDC65Q8IXS2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC65Q8IXS2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.41■■□□□ 1.02
CCDC65Q8IXS2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CCDC65Q8IXS2 TEX21P-204ENST00000641479 1693 ntBASIC21.4■■□□□ 1.02
CCDC65Q8IXS2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.4■■□□□ 1.02
CCDC65Q8IXS2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC65Q8IXS2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC65Q8IXS2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CCDC65Q8IXS2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC65Q8IXS2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.4■■□□□ 1.02
CCDC65Q8IXS2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC65Q8IXS2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC65Q8IXS2 LINC01465-201ENST00000408887 1940 ntBASIC21.4■■□□□ 1.02
CCDC65Q8IXS2 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CCDC65Q8IXS2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC65Q8IXS2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.4■■□□□ 1.02
CCDC65Q8IXS2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CCDC65Q8IXS2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CCDC65Q8IXS2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC65Q8IXS2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC65Q8IXS2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.4■■□□□ 1.02
CCDC65Q8IXS2 AC141586.3-201ENST00000562166 1838 ntBASIC21.4■■□□□ 1.02
CCDC65Q8IXS2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC65Q8IXS2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC65Q8IXS2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC65Q8IXS2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC65Q8IXS2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC65Q8IXS2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC65Q8IXS2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC65Q8IXS2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC65Q8IXS2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
CCDC65Q8IXS2 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC65Q8IXS2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC65Q8IXS2 AL160286.2-201ENST00000567150 934 ntBASIC21.39■■□□□ 1.01
CCDC65Q8IXS2 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.39■■□□□ 1.01
CCDC65Q8IXS2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.39■■□□□ 1.01
CCDC65Q8IXS2 AL359736.2-201ENST00000621992 437 ntBASIC21.39■■□□□ 1.01
CCDC65Q8IXS2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC65Q8IXS2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.39■■□□□ 1.01
CCDC65Q8IXS2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC65Q8IXS2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC65Q8IXS2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CCDC65Q8IXS2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms