Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.57■□□□□ 0.88
VSTM1Q6UX27 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
VSTM1Q6UX27 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VSTM1Q6UX27 UNC93B2-201ENST00000285383 730 ntBASIC20.57■□□□□ 0.88
VSTM1Q6UX27 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.57■□□□□ 0.88
VSTM1Q6UX27 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
VSTM1Q6UX27 RBM17P1-201ENST00000453646 1190 ntBASIC20.57■□□□□ 0.88
VSTM1Q6UX27 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.57■□□□□ 0.88
VSTM1Q6UX27 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.57■□□□□ 0.88
VSTM1Q6UX27 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VSTM1Q6UX27 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.57■□□□□ 0.88
VSTM1Q6UX27 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.57■□□□□ 0.88
VSTM1Q6UX27 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
VSTM1Q6UX27 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
VSTM1Q6UX27 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
VSTM1Q6UX27 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VSTM1Q6UX27 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VSTM1Q6UX27 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
VSTM1Q6UX27 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VSTM1Q6UX27 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
VSTM1Q6UX27 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.56■□□□□ 0.88
VSTM1Q6UX27 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VSTM1Q6UX27 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VSTM1Q6UX27 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VSTM1Q6UX27 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
VSTM1Q6UX27 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.56■□□□□ 0.88
VSTM1Q6UX27 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VSTM1Q6UX27 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
VSTM1Q6UX27 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VSTM1Q6UX27 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.56■□□□□ 0.88
VSTM1Q6UX27 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.56■□□□□ 0.88
VSTM1Q6UX27 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.56■□□□□ 0.88
VSTM1Q6UX27 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VSTM1Q6UX27 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VSTM1Q6UX27 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
VSTM1Q6UX27 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
VSTM1Q6UX27 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.55■□□□□ 0.88
VSTM1Q6UX27 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.55■□□□□ 0.88
VSTM1Q6UX27 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VSTM1Q6UX27 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VSTM1Q6UX27 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
VSTM1Q6UX27 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VSTM1Q6UX27 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
VSTM1Q6UX27 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
VSTM1Q6UX27 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VSTM1Q6UX27 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
VSTM1Q6UX27 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VSTM1Q6UX27 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
VSTM1Q6UX27 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VSTM1Q6UX27 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VSTM1Q6UX27 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.55■□□□□ 0.88
VSTM1Q6UX27 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
VSTM1Q6UX27 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
VSTM1Q6UX27 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VSTM1Q6UX27 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VSTM1Q6UX27 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VSTM1Q6UX27 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VSTM1Q6UX27 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
VSTM1Q6UX27 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VSTM1Q6UX27 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VSTM1Q6UX27 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
VSTM1Q6UX27 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VSTM1Q6UX27 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.54■□□□□ 0.88
VSTM1Q6UX27 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.54■□□□□ 0.88
VSTM1Q6UX27 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.54■□□□□ 0.88
VSTM1Q6UX27 MIR6786-201ENST00000616843 113 ntBASIC20.54■□□□□ 0.88
VSTM1Q6UX27 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VSTM1Q6UX27 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VSTM1Q6UX27 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VSTM1Q6UX27 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.54■□□□□ 0.88
VSTM1Q6UX27 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VSTM1Q6UX27 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VSTM1Q6UX27 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
VSTM1Q6UX27 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.54■□□□□ 0.88
VSTM1Q6UX27 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
VSTM1Q6UX27 AP000974.1-201ENST00000623909 2387 ntBASIC20.53■□□□□ 0.88
VSTM1Q6UX27 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VSTM1Q6UX27 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
VSTM1Q6UX27 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
VSTM1Q6UX27 MMP23A-201ENST00000234610 1017 ntBASIC20.53■□□□□ 0.88
VSTM1Q6UX27 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.53■□□□□ 0.88
VSTM1Q6UX27 MESTP1-201ENST00000404287 994 ntBASIC20.53■□□□□ 0.88
VSTM1Q6UX27 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VSTM1Q6UX27 AC211429.1-201ENST00000415277 523 ntBASIC20.53■□□□□ 0.88
VSTM1Q6UX27 AC087499.1-201ENST00000418141 1075 ntBASIC20.53■□□□□ 0.88
VSTM1Q6UX27 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
VSTM1Q6UX27 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.53■□□□□ 0.88
VSTM1Q6UX27 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.53■□□□□ 0.88
VSTM1Q6UX27 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.53■□□□□ 0.88
VSTM1Q6UX27 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.53■□□□□ 0.88
VSTM1Q6UX27 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.53■□□□□ 0.88
VSTM1Q6UX27 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VSTM1Q6UX27 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.53■□□□□ 0.88
VSTM1Q6UX27 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VSTM1Q6UX27 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VSTM1Q6UX27 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.53■□□□□ 0.88
VSTM1Q6UX27 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.53■□□□□ 0.88
VSTM1Q6UX27 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
VSTM1Q6UX27 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
VSTM1Q6UX27 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms