Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB5BP61020 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB5BP61020 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB5BP61020 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB5BP61020 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB5BP61020 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB5BP61020 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
RAB5BP61020 NARF-205ENST00000412079 1760 ntTSL 5 BASIC15.16■□□□□ 0.02
RAB5BP61020 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RAB5BP61020 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB5BP61020 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB5BP61020 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RAB5BP61020 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB5BP61020 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB5BP61020 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RAB5BP61020 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB5BP61020 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RAB5BP61020 ASB1-202ENST00000409297 878 ntTSL 5 BASIC15.16■□□□□ 0.02
RAB5BP61020 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB5BP61020 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC15.16■□□□□ 0.02
RAB5BP61020 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RAB5BP61020 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB5BP61020 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
RAB5BP61020 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB5BP61020 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB5BP61020 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB5BP61020 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB5BP61020 Z98044.1-201ENST00000632503 1764 ntBASIC15.16■□□□□ 0.02
RAB5BP61020 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB5BP61020 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RAB5BP61020 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB5BP61020 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB5BP61020 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB5BP61020 STX5-203ENST00000394690 1568 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB5BP61020 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB5BP61020 AF131216.4-201ENST00000638924 1588 ntBASIC15.15■□□□□ 0.02
RAB5BP61020 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB5BP61020 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB5BP61020 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB5BP61020 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB5BP61020 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB5BP61020 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB5BP61020 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB5BP61020 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RAB5BP61020 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RAB5BP61020 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB5BP61020 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RAB5BP61020 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB5BP61020 GNAS-203ENST00000306120 1878 ntBASIC15.15■□□□□ 0.02
RAB5BP61020 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RAB5BP61020 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB5BP61020 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB5BP61020 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB5BP61020 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RAB5BP61020 MIR6765-201ENST00000614092 87 ntBASIC15.15■□□□□ 0.02
RAB5BP61020 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
RAB5BP61020 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB5BP61020 AL031598.1-201ENST00000561511 1773 ntBASIC15.15■□□□□ 0.02
RAB5BP61020 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB5BP61020 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RAB5BP61020 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB5BP61020 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RAB5BP61020 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB5BP61020 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB5BP61020 AC080080.1-201ENST00000625121 2420 ntBASIC15.15■□□□□ 0.02
RAB5BP61020 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB5BP61020 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB5BP61020 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB5BP61020 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB5BP61020 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB5BP61020 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB5BP61020 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RAB5BP61020 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RAB5BP61020 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB5BP61020 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB5BP61020 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB5BP61020 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB5BP61020 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB5BP61020 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB5BP61020 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB5BP61020 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB5BP61020 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB5BP61020 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RAB5BP61020 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB5BP61020 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB5BP61020 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.14■□□□□ 0.01
RAB5BP61020 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RAB5BP61020 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB5BP61020 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
RAB5BP61020 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB5BP61020 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB5BP61020 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB5BP61020 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB5BP61020 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB5BP61020 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB5BP61020 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB5BP61020 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB5BP61020 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB5BP61020 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB5BP61020 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms