Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDH4P55283 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDH4P55283 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CDH4P55283 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.76■□□□□ 0.75
CDH4P55283 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH4P55283 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.76■□□□□ 0.75
CDH4P55283 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH4P55283 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CDH4P55283 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH4P55283 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH4P55283 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH4P55283 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH4P55283 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH4P55283 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.76■□□□□ 0.75
CDH4P55283 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.76■□□□□ 0.75
CDH4P55283 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.76■□□□□ 0.75
CDH4P55283 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.76■□□□□ 0.75
CDH4P55283 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH4P55283 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH4P55283 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH4P55283 SDHAP1-207ENST00000440850 2000 ntBASIC19.76■□□□□ 0.75
CDH4P55283 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH4P55283 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.76■□□□□ 0.75
CDH4P55283 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH4P55283 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH4P55283 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
CDH4P55283 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.76■□□□□ 0.75
CDH4P55283 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH4P55283 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.75■□□□□ 0.75
CDH4P55283 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH4P55283 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH4P55283 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH4P55283 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.75■□□□□ 0.75
CDH4P55283 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.75■□□□□ 0.75
CDH4P55283 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CDH4P55283 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH4P55283 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH4P55283 MMP23A-201ENST00000234610 1017 ntBASIC19.75■□□□□ 0.75
CDH4P55283 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH4P55283 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH4P55283 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CDH4P55283 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH4P55283 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH4P55283 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDH4P55283 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.75■□□□□ 0.75
CDH4P55283 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDH4P55283 AC097488.1-201ENST00000507834 756 ntBASIC19.75■□□□□ 0.75
CDH4P55283 FITM1-202ENST00000559294 800 ntBASIC19.75■□□□□ 0.75
CDH4P55283 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.75■□□□□ 0.75
CDH4P55283 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.75■□□□□ 0.75
CDH4P55283 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.75■□□□□ 0.75
CDH4P55283 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH4P55283 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH4P55283 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
CDH4P55283 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.75■□□□□ 0.75
CDH4P55283 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CDH4P55283 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.75■□□□□ 0.75
CDH4P55283 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CDH4P55283 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH4P55283 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH4P55283 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH4P55283 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH4P55283 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.74■□□□□ 0.75
CDH4P55283 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CDH4P55283 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.74■□□□□ 0.75
CDH4P55283 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH4P55283 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.74■□□□□ 0.75
CDH4P55283 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH4P55283 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.74■□□□□ 0.75
CDH4P55283 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.74■□□□□ 0.75
CDH4P55283 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH4P55283 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.74■□□□□ 0.75
CDH4P55283 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.74■□□□□ 0.75
CDH4P55283 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CDH4P55283 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH4P55283 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CDH4P55283 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH4P55283 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH4P55283 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH4P55283 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH4P55283 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH4P55283 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.73■□□□□ 0.75
CDH4P55283 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH4P55283 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CDH4P55283 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDH4P55283 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDH4P55283 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH4P55283 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.73■□□□□ 0.75
CDH4P55283 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH4P55283 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH4P55283 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH4P55283 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDH4P55283 MIR1238-201ENST00000408483 83 ntBASIC19.73■□□□□ 0.75
CDH4P55283 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDH4P55283 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.73■□□□□ 0.75
CDH4P55283 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDH4P55283 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.73■□□□□ 0.75
CDH4P55283 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH4P55283 AP005242.2-201ENST00000580065 1175 ntBASIC19.73■□□□□ 0.75
CDH4P55283 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms