Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.24■□□□□ 0.67
ZNF140P52738 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF140P52738 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF140P52738 RPS2P4-201ENST00000476944 856 ntBASIC19.24■□□□□ 0.67
ZNF140P52738 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF140P52738 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF140P52738 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.24■□□□□ 0.67
ZNF140P52738 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNF140P52738 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF140P52738 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF140P52738 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF140P52738 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
ZNF140P52738 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF140P52738 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF140P52738 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ZNF140P52738 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF140P52738 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF140P52738 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF140P52738 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF140P52738 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ZNF140P52738 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ZNF140P52738 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF140P52738 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF140P52738 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF140P52738 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ZNF140P52738 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.23■□□□□ 0.67
ZNF140P52738 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF140P52738 AC004980.1-204ENST00000429707 299 ntBASIC19.23■□□□□ 0.67
ZNF140P52738 KSR1P1-201ENST00000446298 240 ntBASIC19.23■□□□□ 0.67
ZNF140P52738 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF140P52738 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ZNF140P52738 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF140P52738 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF140P52738 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.23■□□□□ 0.67
ZNF140P52738 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.23■□□□□ 0.67
ZNF140P52738 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF140P52738 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF140P52738 KRT8P41-201ENST00000533985 1514 ntBASIC19.23■□□□□ 0.67
ZNF140P52738 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF140P52738 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF140P52738 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF140P52738 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ZNF140P52738 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ZNF140P52738 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNF140P52738 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNF140P52738 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF140P52738 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNF140P52738 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF140P52738 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF140P52738 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF140P52738 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF140P52738 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF140P52738 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF140P52738 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF140P52738 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF140P52738 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF140P52738 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF140P52738 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF140P52738 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
ZNF140P52738 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ZNF140P52738 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.22■□□□□ 0.67
ZNF140P52738 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNF140P52738 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF140P52738 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNF140P52738 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF140P52738 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF140P52738 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF140P52738 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF140P52738 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.21■□□□□ 0.67
ZNF140P52738 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF140P52738 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF140P52738 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF140P52738 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF140P52738 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF140P52738 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ZNF140P52738 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF140P52738 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF140P52738 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF140P52738 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF140P52738 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF140P52738 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.21■□□□□ 0.67
ZNF140P52738 UBE2SP1-201ENST00000450587 669 ntBASIC19.21■□□□□ 0.67
ZNF140P52738 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF140P52738 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.21■□□□□ 0.67
ZNF140P52738 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF140P52738 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF140P52738 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF140P52738 TMEM191A-211ENST00000637163 1067 ntBASIC19.21■□□□□ 0.67
ZNF140P52738 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF140P52738 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF140P52738 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF140P52738 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.21■□□□□ 0.67
ZNF140P52738 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF140P52738 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF140P52738 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF140P52738 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF140P52738 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF140P52738 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF140P52738 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.2■□□□□ 0.66
ZNF140P52738 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms