Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SLC6A9P48067 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A9P48067 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A9P48067 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SLC6A9P48067 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A9P48067 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC6A9P48067 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.05■□□□□ 0.32
SLC6A9P48067 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A9P48067 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A9P48067 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A9P48067 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A9P48067 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A9P48067 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.05■□□□□ 0.32
SLC6A9P48067 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SLC6A9P48067 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A9P48067 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC6A9P48067 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A9P48067 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC6A9P48067 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.05■□□□□ 0.32
SLC6A9P48067 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.05■□□□□ 0.32
SLC6A9P48067 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A9P48067 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A9P48067 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A9P48067 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A9P48067 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A9P48067 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A9P48067 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC6A9P48067 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A9P48067 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A9P48067 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
SLC6A9P48067 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC6A9P48067 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A9P48067 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC6A9P48067 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A9P48067 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A9P48067 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A9P48067 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SLC6A9P48067 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC6A9P48067 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A9P48067 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A9P48067 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A9P48067 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A9P48067 TSPY20P-201ENST00000450910 630 ntBASIC17.04■□□□□ 0.32
SLC6A9P48067 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.04■□□□□ 0.32
SLC6A9P48067 RNA5SP413-201ENST00000516373 109 ntBASIC17.04■□□□□ 0.32
SLC6A9P48067 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.04■□□□□ 0.32
SLC6A9P48067 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC6A9P48067 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
SLC6A9P48067 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A9P48067 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A9P48067 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A9P48067 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
SLC6A9P48067 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A9P48067 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SLC6A9P48067 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SLC6A9P48067 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC6A9P48067 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC6A9P48067 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
SLC6A9P48067 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A9P48067 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A9P48067 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A9P48067 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A9P48067 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A9P48067 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC6A9P48067 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.03■□□□□ 0.32
SLC6A9P48067 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A9P48067 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.03■□□□□ 0.32
SLC6A9P48067 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A9P48067 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SLC6A9P48067 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A9P48067 AP006587.1-201ENST00000534129 1502 ntBASIC17.03■□□□□ 0.32
SLC6A9P48067 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A9P48067 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A9P48067 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC6A9P48067 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A9P48067 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.03■□□□□ 0.32
SLC6A9P48067 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.03■□□□□ 0.32
SLC6A9P48067 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.03■□□□□ 0.32
SLC6A9P48067 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.03■□□□□ 0.32
SLC6A9P48067 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.03■□□□□ 0.32
SLC6A9P48067 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.03■□□□□ 0.32
SLC6A9P48067 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.03■□□□□ 0.32
SLC6A9P48067 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A9P48067 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A9P48067 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SLC6A9P48067 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A9P48067 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A9P48067 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SLC6A9P48067 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A9P48067 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A9P48067 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A9P48067 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.03■□□□□ 0.32
SLC6A9P48067 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.03■□□□□ 0.32
SLC6A9P48067 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC6A9P48067 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC6A9P48067 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC6A9P48067 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC6A9P48067 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC6A9P48067 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC6A9P48067 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms