Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.22■□□□□ 0.83
MTHFRP42898 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.22■□□□□ 0.83
MTHFRP42898 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.22■□□□□ 0.83
MTHFRP42898 CKBP1-201ENST00000565489 1086 ntBASIC20.22■□□□□ 0.83
MTHFRP42898 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.22■□□□□ 0.83
MTHFRP42898 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.22■□□□□ 0.83
MTHFRP42898 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.22■□□□□ 0.83
MTHFRP42898 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.22■□□□□ 0.83
MTHFRP42898 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFRP42898 AC006128.1-201ENST00000624704 1661 ntBASIC20.22■□□□□ 0.83
MTHFRP42898 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFRP42898 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFRP42898 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFRP42898 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.21■□□□□ 0.83
MTHFRP42898 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MTHFRP42898 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.21■□□□□ 0.83
MTHFRP42898 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.21■□□□□ 0.83
MTHFRP42898 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MTHFRP42898 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MTHFRP42898 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.21■□□□□ 0.83
MTHFRP42898 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.21■□□□□ 0.83
MTHFRP42898 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.21■□□□□ 0.83
MTHFRP42898 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.21■□□□□ 0.83
MTHFRP42898 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
MTHFRP42898 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
MTHFRP42898 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MTHFRP42898 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MTHFRP42898 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
MTHFRP42898 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.21■□□□□ 0.83
MTHFRP42898 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
MTHFRP42898 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MTHFRP42898 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.21■□□□□ 0.83
MTHFRP42898 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MTHFRP42898 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MTHFRP42898 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.83
MTHFRP42898 AC007225.1-201ENST00000566331 1836 ntBASIC20.2■□□□□ 0.82
MTHFRP42898 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.2■□□□□ 0.82
MTHFRP42898 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MTHFRP42898 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MTHFRP42898 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MTHFRP42898 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MTHFRP42898 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MTHFRP42898 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.2■□□□□ 0.82
MTHFRP42898 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.2■□□□□ 0.82
MTHFRP42898 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MTHFRP42898 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MTHFRP42898 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MTHFRP42898 ZNF444P1-201ENST00000559497 298 ntBASIC20.2■□□□□ 0.82
MTHFRP42898 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.2■□□□□ 0.82
MTHFRP42898 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.2■□□□□ 0.82
MTHFRP42898 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
MTHFRP42898 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
MTHFRP42898 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MTHFRP42898 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MTHFRP42898 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
MTHFRP42898 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
MTHFRP42898 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MTHFRP42898 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MTHFRP42898 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MTHFRP42898 KRT8P45-201ENST00000414328 1447 ntBASIC20.19■□□□□ 0.82
MTHFRP42898 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
MTHFRP42898 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MTHFRP42898 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
MTHFRP42898 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MTHFRP42898 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MTHFRP42898 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MTHFRP42898 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MTHFRP42898 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
MTHFRP42898 AC112907.2-201ENST00000448639 330 ntBASIC20.19■□□□□ 0.82
MTHFRP42898 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.19■□□□□ 0.82
MTHFRP42898 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
MTHFRP42898 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.19■□□□□ 0.82
MTHFRP42898 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
MTHFRP42898 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
MTHFRP42898 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MTHFRP42898 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MTHFRP42898 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MTHFRP42898 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
MTHFRP42898 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MTHFRP42898 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MTHFRP42898 AL157384.1-201ENST00000445995 2473 ntBASIC20.18■□□□□ 0.82
MTHFRP42898 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MTHFRP42898 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MTHFRP42898 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MTHFRP42898 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.18■□□□□ 0.82
MTHFRP42898 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MTHFRP42898 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.18■□□□□ 0.82
MTHFRP42898 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.18■□□□□ 0.82
MTHFRP42898 NEK4P2-201ENST00000580004 1012 ntBASIC20.18■□□□□ 0.82
MTHFRP42898 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.18■□□□□ 0.82
MTHFRP42898 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.18■□□□□ 0.82
MTHFRP42898 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
MTHFRP42898 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.18■□□□□ 0.82
MTHFRP42898 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MTHFRP42898 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.18■□□□□ 0.82
MTHFRP42898 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MTHFRP42898 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
MTHFRP42898 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MTHFRP42898 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
MTHFRP42898 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms