Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 AL355001.2-201ENST00000620617 1191 ntBASIC13.33□□□□□ -0.28
RPL13AP40429 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
RPL13AP40429 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL13AP40429 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC13.33□□□□□ -0.28
RPL13AP40429 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL13AP40429 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL13AP40429 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL13AP40429 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL13AP40429 PWWP2AP1-201ENST00000429776 2273 ntBASIC13.33□□□□□ -0.28
RPL13AP40429 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RPL13AP40429 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RPL13AP40429 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL13AP40429 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL13AP40429 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RPL13AP40429 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL13AP40429 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC13.32□□□□□ -0.28
RPL13AP40429 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RPL13AP40429 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL13AP40429 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL13AP40429 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL13AP40429 AL133373.2-201ENST00000623187 2828 ntBASIC13.32□□□□□ -0.28
RPL13AP40429 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RPL13AP40429 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RPL13AP40429 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RPL13AP40429 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL13AP40429 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RPL13AP40429 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.32□□□□□ -0.28
RPL13AP40429 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL13AP40429 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC13.32□□□□□ -0.28
RPL13AP40429 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RPL13AP40429 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL13AP40429 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RPL13AP40429 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RPL13AP40429 PTCHD3P2-201ENST00000424937 1205 ntBASIC13.32□□□□□ -0.28
RPL13AP40429 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC13.32□□□□□ -0.28
RPL13AP40429 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RPL13AP40429 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL13AP40429 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RPL13AP40429 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL13AP40429 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RPL13AP40429 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
RPL13AP40429 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
RPL13AP40429 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL13AP40429 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL13AP40429 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC13.32□□□□□ -0.28
RPL13AP40429 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL13AP40429 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL13AP40429 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL13AP40429 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL13AP40429 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
RPL13AP40429 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC13.32□□□□□ -0.28
RPL13AP40429 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL13AP40429 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL13AP40429 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL13AP40429 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL13AP40429 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL13AP40429 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RPL13AP40429 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
RPL13AP40429 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RPL13AP40429 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RPL13AP40429 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RPL13AP40429 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RPL13AP40429 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
RPL13AP40429 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RPL13AP40429 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC13.31□□□□□ -0.28
RPL13AP40429 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RPL13AP40429 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RPL13AP40429 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RPL13AP40429 AP006587.3-201ENST00000525742 1516 ntBASIC13.31□□□□□ -0.28
RPL13AP40429 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC13.31□□□□□ -0.28
RPL13AP40429 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RPL13AP40429 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC13.31□□□□□ -0.28
RPL13AP40429 AC024257.2-201ENST00000549699 147 ntBASIC13.31□□□□□ -0.28
RPL13AP40429 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC13.31□□□□□ -0.28
RPL13AP40429 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC13.31□□□□□ -0.28
RPL13AP40429 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RPL13AP40429 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RPL13AP40429 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RPL13AP40429 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RPL13AP40429 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RPL13AP40429 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RPL13AP40429 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RPL13AP40429 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RPL13AP40429 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RPL13AP40429 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC13.31□□□□□ -0.28
RPL13AP40429 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RPL13AP40429 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPL13AP40429 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC13.3□□□□□ -0.28
RPL13AP40429 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RPL13AP40429 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPL13AP40429 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPL13AP40429 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RPL13AP40429 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC13.3□□□□□ -0.28
RPL13AP40429 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPL13AP40429 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPL13AP40429 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPL13AP40429 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPL13AP40429 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPL13AP40429 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPL13AP40429 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms