Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
KRT9P35527 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
KRT9P35527 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KRT9P35527 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT9P35527 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.1■□□□□ 0.97
KRT9P35527 AC092368.3-202ENST00000574180 1591 ntBASIC21.1■□□□□ 0.97
KRT9P35527 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
KRT9P35527 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT9P35527 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT9P35527 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT9P35527 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT9P35527 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT9P35527 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT9P35527 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KRT9P35527 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.1■□□□□ 0.97
KRT9P35527 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.1■□□□□ 0.97
KRT9P35527 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.1■□□□□ 0.97
KRT9P35527 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.1■□□□□ 0.97
KRT9P35527 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT9P35527 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KRT9P35527 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KRT9P35527 AC083880.1-201ENST00000608266 535 ntBASIC21.1■□□□□ 0.97
KRT9P35527 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KRT9P35527 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT9P35527 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT9P35527 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KRT9P35527 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT9P35527 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT9P35527 AC020763.4-201ENST00000623414 4170 ntBASIC21.1■□□□□ 0.97
KRT9P35527 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
KRT9P35527 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.1■□□□□ 0.97
KRT9P35527 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.1■□□□□ 0.97
KRT9P35527 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.09■□□□□ 0.97
KRT9P35527 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.09■□□□□ 0.97
KRT9P35527 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
KRT9P35527 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT9P35527 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.09■□□□□ 0.97
KRT9P35527 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KRT9P35527 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.09■□□□□ 0.97
KRT9P35527 ID1-201ENST00000376105 1233 ntBASIC21.09■□□□□ 0.97
KRT9P35527 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.09■□□□□ 0.97
KRT9P35527 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.09■□□□□ 0.97
KRT9P35527 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.09■□□□□ 0.97
KRT9P35527 AC006557.6-201ENST00000623071 864 ntBASIC21.09■□□□□ 0.97
KRT9P35527 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.09■□□□□ 0.97
KRT9P35527 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT9P35527 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.09■□□□□ 0.97
KRT9P35527 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.09■□□□□ 0.97
KRT9P35527 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT9P35527 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
KRT9P35527 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT9P35527 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.09■□□□□ 0.97
KRT9P35527 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KRT9P35527 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT9P35527 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.09■□□□□ 0.97
KRT9P35527 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
KRT9P35527 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
KRT9P35527 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KRT9P35527 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.08■□□□□ 0.97
KRT9P35527 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
KRT9P35527 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.97
KRT9P35527 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KRT9P35527 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KRT9P35527 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
KRT9P35527 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
KRT9P35527 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.08■□□□□ 0.97
KRT9P35527 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.08■□□□□ 0.97
KRT9P35527 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.08■□□□□ 0.97
KRT9P35527 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
KRT9P35527 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
KRT9P35527 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
KRT9P35527 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
KRT9P35527 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.08■□□□□ 0.96
KRT9P35527 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.07■□□□□ 0.96
KRT9P35527 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KRT9P35527 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
KRT9P35527 ZNF815P-204ENST00000434898 1737 ntBASIC21.07■□□□□ 0.96
KRT9P35527 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
KRT9P35527 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KRT9P35527 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KRT9P35527 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.07■□□□□ 0.96
KRT9P35527 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KRT9P35527 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.07■□□□□ 0.96
KRT9P35527 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.07■□□□□ 0.96
KRT9P35527 AC060766.5-201ENST00000590539 871 ntBASIC21.07■□□□□ 0.96
KRT9P35527 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KRT9P35527 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
KRT9P35527 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KRT9P35527 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KRT9P35527 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
KRT9P35527 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KRT9P35527 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KRT9P35527 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KRT9P35527 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KRT9P35527 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KRT9P35527 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KRT9P35527 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT9P35527 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.06■□□□□ 0.96
KRT9P35527 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KRT9P35527 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms