Protein–RNA interactions for Protein: P0CJ79

ZNF888, Zinc finger protein 888, humanhuman

Predicted RBP Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF888P0CJ79 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.36■□□□□ 0.53
ZNF888P0CJ79 SDHAP1-207ENST00000440850 2000 ntBASIC18.36■□□□□ 0.53
ZNF888P0CJ79 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.36■□□□□ 0.53
ZNF888P0CJ79 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.36■□□□□ 0.53
ZNF888P0CJ79 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.36■□□□□ 0.53
ZNF888P0CJ79 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.36■□□□□ 0.53
ZNF888P0CJ79 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF888P0CJ79 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.36■□□□□ 0.53
ZNF888P0CJ79 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.36■□□□□ 0.53
ZNF888P0CJ79 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.36■□□□□ 0.53
ZNF888P0CJ79 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
ZNF888P0CJ79 AC131212.4-201ENST00000623606 975 ntBASIC18.36■□□□□ 0.53
ZNF888P0CJ79 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
ZNF888P0CJ79 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF888P0CJ79 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF888P0CJ79 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.35■□□□□ 0.53
ZNF888P0CJ79 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF888P0CJ79 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.35■□□□□ 0.53
ZNF888P0CJ79 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF888P0CJ79 AC004980.1-204ENST00000429707 299 ntBASIC18.35■□□□□ 0.53
ZNF888P0CJ79 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF888P0CJ79 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF888P0CJ79 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.35■□□□□ 0.53
ZNF888P0CJ79 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.35■□□□□ 0.53
ZNF888P0CJ79 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF888P0CJ79 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF888P0CJ79 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF888P0CJ79 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF888P0CJ79 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF888P0CJ79 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ZNF888P0CJ79 AC116562.4-201ENST00000641316 2276 ntBASIC18.35■□□□□ 0.53
ZNF888P0CJ79 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF888P0CJ79 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF888P0CJ79 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF888P0CJ79 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF888P0CJ79 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF888P0CJ79 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF888P0CJ79 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF888P0CJ79 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ZNF888P0CJ79 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF888P0CJ79 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF888P0CJ79 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.34■□□□□ 0.53
ZNF888P0CJ79 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF888P0CJ79 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF888P0CJ79 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.34■□□□□ 0.53
ZNF888P0CJ79 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.34■□□□□ 0.53
ZNF888P0CJ79 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
ZNF888P0CJ79 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.34■□□□□ 0.53
ZNF888P0CJ79 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF888P0CJ79 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF888P0CJ79 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF888P0CJ79 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ZNF888P0CJ79 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF888P0CJ79 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ZNF888P0CJ79 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF888P0CJ79 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
ZNF888P0CJ79 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.33■□□□□ 0.53
ZNF888P0CJ79 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF888P0CJ79 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF888P0CJ79 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
ZNF888P0CJ79 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
ZNF888P0CJ79 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
ZNF888P0CJ79 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.33■□□□□ 0.53
ZNF888P0CJ79 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.33■□□□□ 0.53
ZNF888P0CJ79 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ZNF888P0CJ79 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF888P0CJ79 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.33■□□□□ 0.52
ZNF888P0CJ79 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF888P0CJ79 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
ZNF888P0CJ79 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
ZNF888P0CJ79 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.33■□□□□ 0.52
ZNF888P0CJ79 TSPY7P-201ENST00000431358 1114 ntBASIC18.33■□□□□ 0.52
ZNF888P0CJ79 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF888P0CJ79 SNORA78-201ENST00000459373 127 ntBASIC18.33■□□□□ 0.52
ZNF888P0CJ79 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF888P0CJ79 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF888P0CJ79 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF888P0CJ79 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.33■□□□□ 0.52
ZNF888P0CJ79 AL031985.4-201ENST00000642138 673 ntBASIC18.33■□□□□ 0.52
ZNF888P0CJ79 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF888P0CJ79 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF888P0CJ79 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF888P0CJ79 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
ZNF888P0CJ79 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF888P0CJ79 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF888P0CJ79 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF888P0CJ79 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ZNF888P0CJ79 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF888P0CJ79 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF888P0CJ79 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ZNF888P0CJ79 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF888P0CJ79 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF888P0CJ79 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF888P0CJ79 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF888P0CJ79 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF888P0CJ79 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF888P0CJ79 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ZNF888P0CJ79 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ZNF888P0CJ79 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF888P0CJ79 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms