Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RBP1P09455 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RBP1P09455 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RBP1P09455 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RBP1P09455 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.02■□□□□ 0.64
RBP1P09455 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.02■□□□□ 0.64
RBP1P09455 PNMA6B-201ENST00000538162 1200 ntBASIC19.02■□□□□ 0.64
RBP1P09455 AC060766.5-201ENST00000590539 871 ntBASIC19.02■□□□□ 0.64
RBP1P09455 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.02■□□□□ 0.64
RBP1P09455 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.02■□□□□ 0.64
RBP1P09455 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.02■□□□□ 0.64
RBP1P09455 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RBP1P09455 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RBP1P09455 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RBP1P09455 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.63
RBP1P09455 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.02■□□□□ 0.63
RBP1P09455 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RBP1P09455 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RBP1P09455 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
RBP1P09455 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RBP1P09455 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RBP1P09455 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RBP1P09455 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
RBP1P09455 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
RBP1P09455 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RBP1P09455 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RBP1P09455 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RBP1P09455 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.01■□□□□ 0.63
RBP1P09455 AC006333.2-201ENST00000607957 2099 ntBASIC19.01■□□□□ 0.63
RBP1P09455 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RBP1P09455 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.01■□□□□ 0.63
RBP1P09455 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.01■□□□□ 0.63
RBP1P09455 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.01■□□□□ 0.63
RBP1P09455 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.01■□□□□ 0.63
RBP1P09455 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.01■□□□□ 0.63
RBP1P09455 AC120498.8-201ENST00000614275 531 ntBASIC19.01■□□□□ 0.63
RBP1P09455 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RBP1P09455 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
RBP1P09455 SDHAP1-207ENST00000440850 2000 ntBASIC19.01■□□□□ 0.63
RBP1P09455 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RBP1P09455 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RBP1P09455 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RBP1P09455 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RBP1P09455 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RBP1P09455 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RBP1P09455 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RBP1P09455 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19■□□□□ 0.63
RBP1P09455 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
RBP1P09455 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RBP1P09455 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
RBP1P09455 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19■□□□□ 0.63
RBP1P09455 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RBP1P09455 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RBP1P09455 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RBP1P09455 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19■□□□□ 0.63
RBP1P09455 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19■□□□□ 0.63
RBP1P09455 OR2A1-AS1-207ENST00000486094 819 ntBASIC19■□□□□ 0.63
RBP1P09455 KRT18P16-201ENST00000510337 1294 ntBASIC19■□□□□ 0.63
RBP1P09455 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19■□□□□ 0.63
RBP1P09455 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19■□□□□ 0.63
RBP1P09455 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19■□□□□ 0.63
RBP1P09455 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
RBP1P09455 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
RBP1P09455 AL121829.2-201ENST00000620908 328 ntBASIC19■□□□□ 0.63
RBP1P09455 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19■□□□□ 0.63
RBP1P09455 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RBP1P09455 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19■□□□□ 0.63
RBP1P09455 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RBP1P09455 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RBP1P09455 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RBP1P09455 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19■□□□□ 0.63
RBP1P09455 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RBP1P09455 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RBP1P09455 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
RBP1P09455 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RBP1P09455 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19■□□□□ 0.63
RBP1P09455 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19■□□□□ 0.63
RBP1P09455 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19■□□□□ 0.63
RBP1P09455 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.99■□□□□ 0.63
RBP1P09455 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
RBP1P09455 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.99■□□□□ 0.63
RBP1P09455 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RBP1P09455 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RBP1P09455 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.99■□□□□ 0.63
RBP1P09455 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RBP1P09455 AC138932.1-201ENST00000534164 6830 ntBASIC18.99■□□□□ 0.63
RBP1P09455 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RBP1P09455 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RBP1P09455 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RBP1P09455 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RBP1P09455 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RBP1P09455 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RBP1P09455 TUBB8P6-201ENST00000436895 1288 ntBASIC18.99■□□□□ 0.63
RBP1P09455 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.99■□□□□ 0.63
RBP1P09455 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.99■□□□□ 0.63
RBP1P09455 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RBP1P09455 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RBP1P09455 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.99■□□□□ 0.63
RBP1P09455 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.98■□□□□ 0.63
RBP1P09455 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms