Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.02■□□□□ 0.8
CD48P09326 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CD48P09326 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CD48P09326 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.02■□□□□ 0.8
CD48P09326 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.02■□□□□ 0.8
CD48P09326 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.02■□□□□ 0.8
CD48P09326 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.02■□□□□ 0.8
CD48P09326 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.02■□□□□ 0.8
CD48P09326 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.02■□□□□ 0.8
CD48P09326 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CD48P09326 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CD48P09326 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CD48P09326 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CD48P09326 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CD48P09326 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CD48P09326 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CD48P09326 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CD48P09326 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CD48P09326 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CD48P09326 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.02■□□□□ 0.79
CD48P09326 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CD48P09326 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
CD48P09326 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CD48P09326 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.79
CD48P09326 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CD48P09326 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.01■□□□□ 0.79
CD48P09326 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CD48P09326 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CD48P09326 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CD48P09326 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CD48P09326 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.01■□□□□ 0.79
CD48P09326 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.01■□□□□ 0.79
CD48P09326 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.01■□□□□ 0.79
CD48P09326 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CD48P09326 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.01■□□□□ 0.79
CD48P09326 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CD48P09326 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.01■□□□□ 0.79
CD48P09326 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.01■□□□□ 0.79
CD48P09326 C1QL1P1-201ENST00000568105 661 ntBASIC20.01■□□□□ 0.79
CD48P09326 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CD48P09326 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CD48P09326 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CD48P09326 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.01■□□□□ 0.79
CD48P09326 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CD48P09326 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.01■□□□□ 0.79
CD48P09326 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.01■□□□□ 0.79
CD48P09326 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CD48P09326 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CD48P09326 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20■□□□□ 0.79
CD48P09326 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20■□□□□ 0.79
CD48P09326 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
CD48P09326 AC239809.2-201ENST00000415381 517 ntBASIC20■□□□□ 0.79
CD48P09326 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CD48P09326 AC128676.1-201ENST00000454392 318 ntBASIC20■□□□□ 0.79
CD48P09326 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CD48P09326 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CD48P09326 RN7SL471P-201ENST00000580476 299 ntBASIC20■□□□□ 0.79
CD48P09326 AC124016.1-201ENST00000609552 612 ntBASIC20■□□□□ 0.79
CD48P09326 HLA-A-209ENST00000638375 975 ntBASIC20■□□□□ 0.79
CD48P09326 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20■□□□□ 0.79
CD48P09326 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20■□□□□ 0.79
CD48P09326 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CD48P09326 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CD48P09326 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
CD48P09326 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CD48P09326 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CD48P09326 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CD48P09326 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20■□□□□ 0.79
CD48P09326 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CD48P09326 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CD48P09326 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CD48P09326 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CD48P09326 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CD48P09326 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CD48P09326 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.99■□□□□ 0.79
CD48P09326 AC093503.3-201ENST00000624917 2352 ntBASIC19.99■□□□□ 0.79
CD48P09326 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.99■□□□□ 0.79
CD48P09326 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CD48P09326 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.99■□□□□ 0.79
CD48P09326 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.99■□□□□ 0.79
CD48P09326 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.99■□□□□ 0.79
CD48P09326 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.99■□□□□ 0.79
CD48P09326 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.99■□□□□ 0.79
CD48P09326 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.99■□□□□ 0.79
CD48P09326 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CD48P09326 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CD48P09326 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CD48P09326 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CD48P09326 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CD48P09326 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CD48P09326 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.99■□□□□ 0.79
CD48P09326 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
CD48P09326 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
CD48P09326 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CD48P09326 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CD48P09326 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
CD48P09326 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
CD48P09326 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CD48P09326 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CD48P09326 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms