Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
THBS1P07996 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
THBS1P07996 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.77■□□□□ 0.43
THBS1P07996 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
THBS1P07996 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
THBS1P07996 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.77■□□□□ 0.43
THBS1P07996 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
THBS1P07996 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
THBS1P07996 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
THBS1P07996 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
THBS1P07996 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
THBS1P07996 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
THBS1P07996 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
THBS1P07996 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
THBS1P07996 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
THBS1P07996 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
THBS1P07996 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.76■□□□□ 0.43
THBS1P07996 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
THBS1P07996 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
THBS1P07996 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
THBS1P07996 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
THBS1P07996 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.76■□□□□ 0.43
THBS1P07996 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
THBS1P07996 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
THBS1P07996 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
THBS1P07996 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
THBS1P07996 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
THBS1P07996 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
THBS1P07996 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.76■□□□□ 0.43
THBS1P07996 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
THBS1P07996 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.76■□□□□ 0.43
THBS1P07996 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
THBS1P07996 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.76■□□□□ 0.43
THBS1P07996 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
THBS1P07996 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.76■□□□□ 0.43
THBS1P07996 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.76■□□□□ 0.43
THBS1P07996 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
THBS1P07996 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
THBS1P07996 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
THBS1P07996 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
THBS1P07996 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
THBS1P07996 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
THBS1P07996 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
THBS1P07996 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
THBS1P07996 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.76■□□□□ 0.43
THBS1P07996 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.76■□□□□ 0.43
THBS1P07996 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
THBS1P07996 NBPF21P-201ENST00000425093 1451 ntBASIC17.75■□□□□ 0.43
THBS1P07996 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.75■□□□□ 0.43
THBS1P07996 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.75■□□□□ 0.43
THBS1P07996 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.75■□□□□ 0.43
THBS1P07996 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.75■□□□□ 0.43
THBS1P07996 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
THBS1P07996 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
THBS1P07996 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
THBS1P07996 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
THBS1P07996 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
THBS1P07996 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.75■□□□□ 0.43
THBS1P07996 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
THBS1P07996 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
THBS1P07996 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
THBS1P07996 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
THBS1P07996 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
THBS1P07996 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
THBS1P07996 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
THBS1P07996 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
THBS1P07996 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
THBS1P07996 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.75■□□□□ 0.43
THBS1P07996 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
THBS1P07996 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
THBS1P07996 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
THBS1P07996 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
THBS1P07996 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
THBS1P07996 KRT17P3-201ENST00000420566 1262 ntBASIC17.75■□□□□ 0.43
THBS1P07996 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
THBS1P07996 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
THBS1P07996 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.75■□□□□ 0.43
THBS1P07996 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
THBS1P07996 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
THBS1P07996 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.75■□□□□ 0.43
THBS1P07996 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
THBS1P07996 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
THBS1P07996 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.75■□□□□ 0.43
THBS1P07996 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
THBS1P07996 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
THBS1P07996 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
THBS1P07996 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
THBS1P07996 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
THBS1P07996 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
THBS1P07996 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.74■□□□□ 0.43
THBS1P07996 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
THBS1P07996 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
THBS1P07996 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
THBS1P07996 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
THBS1P07996 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
THBS1P07996 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
THBS1P07996 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
THBS1P07996 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
THBS1P07996 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
THBS1P07996 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms