Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
APOA4P06727 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
APOA4P06727 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
APOA4P06727 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.34■□□□□ 0.69
APOA4P06727 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
APOA4P06727 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.34■□□□□ 0.69
APOA4P06727 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.34■□□□□ 0.69
APOA4P06727 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
APOA4P06727 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.34■□□□□ 0.69
APOA4P06727 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
APOA4P06727 PRKY-204ENST00000533551 1019 ntBASIC19.34■□□□□ 0.69
APOA4P06727 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
APOA4P06727 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
APOA4P06727 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.34■□□□□ 0.69
APOA4P06727 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
APOA4P06727 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
APOA4P06727 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
APOA4P06727 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
APOA4P06727 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
APOA4P06727 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
APOA4P06727 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.33■□□□□ 0.69
APOA4P06727 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
APOA4P06727 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
APOA4P06727 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
APOA4P06727 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.33■□□□□ 0.69
APOA4P06727 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.33■□□□□ 0.69
APOA4P06727 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.33■□□□□ 0.69
APOA4P06727 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.33■□□□□ 0.69
APOA4P06727 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
APOA4P06727 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
APOA4P06727 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
APOA4P06727 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.33■□□□□ 0.68
APOA4P06727 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
APOA4P06727 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
APOA4P06727 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.33■□□□□ 0.68
APOA4P06727 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.33■□□□□ 0.68
APOA4P06727 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
APOA4P06727 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.33■□□□□ 0.68
APOA4P06727 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.33■□□□□ 0.68
APOA4P06727 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
APOA4P06727 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
APOA4P06727 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
APOA4P06727 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
APOA4P06727 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
APOA4P06727 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
APOA4P06727 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
APOA4P06727 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
APOA4P06727 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
APOA4P06727 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
APOA4P06727 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
APOA4P06727 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
APOA4P06727 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
APOA4P06727 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
APOA4P06727 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
APOA4P06727 AP006587.1-201ENST00000534129 1502 ntBASIC19.32■□□□□ 0.68
APOA4P06727 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.32■□□□□ 0.68
APOA4P06727 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
APOA4P06727 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
APOA4P06727 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
APOA4P06727 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
APOA4P06727 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
APOA4P06727 POU5F1P3-201ENST00000428824 1078 ntBASIC19.32■□□□□ 0.68
APOA4P06727 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.32■□□□□ 0.68
APOA4P06727 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
APOA4P06727 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
APOA4P06727 MIR4651-201ENST00000582622 73 ntBASIC19.32■□□□□ 0.68
APOA4P06727 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.32■□□□□ 0.68
APOA4P06727 AC069544.1-201ENST00000609399 999 ntBASIC19.32■□□□□ 0.68
APOA4P06727 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
APOA4P06727 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
APOA4P06727 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.32■□□□□ 0.68
APOA4P06727 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
APOA4P06727 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
APOA4P06727 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
APOA4P06727 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
APOA4P06727 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
APOA4P06727 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
APOA4P06727 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
APOA4P06727 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.32■□□□□ 0.68
APOA4P06727 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.32■□□□□ 0.68
APOA4P06727 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
APOA4P06727 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
APOA4P06727 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
APOA4P06727 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.31■□□□□ 0.68
APOA4P06727 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
APOA4P06727 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.31■□□□□ 0.68
APOA4P06727 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
APOA4P06727 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
APOA4P06727 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
APOA4P06727 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
APOA4P06727 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
APOA4P06727 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.31■□□□□ 0.68
APOA4P06727 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
APOA4P06727 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.31■□□□□ 0.68
APOA4P06727 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
APOA4P06727 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
APOA4P06727 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.31■□□□□ 0.68
APOA4P06727 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
APOA4P06727 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
APOA4P06727 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms