Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD3DP04234 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD3DP04234 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.39■□□□□ 0.21
CD3DP04234 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CD3DP04234 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD3DP04234 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.39■□□□□ 0.21
CD3DP04234 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.39■□□□□ 0.21
CD3DP04234 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD3DP04234 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.39■□□□□ 0.21
CD3DP04234 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD3DP04234 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD3DP04234 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD3DP04234 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD3DP04234 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD3DP04234 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CD3DP04234 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CD3DP04234 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.39■□□□□ 0.21
CD3DP04234 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.39■□□□□ 0.21
CD3DP04234 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD3DP04234 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD3DP04234 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
CD3DP04234 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD3DP04234 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD3DP04234 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.38■□□□□ 0.21
CD3DP04234 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CD3DP04234 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CD3DP04234 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.38■□□□□ 0.21
CD3DP04234 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CD3DP04234 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD3DP04234 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CD3DP04234 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CD3DP04234 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD3DP04234 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CD3DP04234 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD3DP04234 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CD3DP04234 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.38■□□□□ 0.21
CD3DP04234 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.38■□□□□ 0.21
CD3DP04234 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD3DP04234 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.38■□□□□ 0.21
CD3DP04234 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.38■□□□□ 0.21
CD3DP04234 AC020916.1-201ENST00000587762 1774 ntBASIC16.38■□□□□ 0.21
CD3DP04234 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CD3DP04234 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD3DP04234 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
CD3DP04234 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
CD3DP04234 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD3DP04234 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD3DP04234 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD3DP04234 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD3DP04234 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.37■□□□□ 0.21
CD3DP04234 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD3DP04234 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.37■□□□□ 0.21
CD3DP04234 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.37■□□□□ 0.21
CD3DP04234 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CD3DP04234 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD3DP04234 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD3DP04234 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.37■□□□□ 0.21
CD3DP04234 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.37■□□□□ 0.21
CD3DP04234 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.37■□□□□ 0.21
CD3DP04234 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD3DP04234 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CD3DP04234 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CD3DP04234 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.37■□□□□ 0.21
CD3DP04234 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD3DP04234 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD3DP04234 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD3DP04234 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD3DP04234 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
CD3DP04234 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD3DP04234 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD3DP04234 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.37■□□□□ 0.21
CD3DP04234 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.36■□□□□ 0.21
CD3DP04234 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
CD3DP04234 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD3DP04234 AC004854.2-201ENST00000608450 1441 ntBASIC16.36■□□□□ 0.21
CD3DP04234 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.36■□□□□ 0.21
CD3DP04234 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.36■□□□□ 0.21
CD3DP04234 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD3DP04234 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD3DP04234 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.36■□□□□ 0.21
CD3DP04234 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.36■□□□□ 0.21
CD3DP04234 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD3DP04234 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD3DP04234 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CD3DP04234 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.36■□□□□ 0.21
CD3DP04234 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD3DP04234 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CD3DP04234 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD3DP04234 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.36■□□□□ 0.21
CD3DP04234 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
CD3DP04234 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CD3DP04234 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CD3DP04234 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.36■□□□□ 0.21
CD3DP04234 SUDS3P1-201ENST00000505831 966 ntBASIC16.36■□□□□ 0.21
CD3DP04234 AC110285.6-201ENST00000617652 491 ntBASIC16.36■□□□□ 0.21
CD3DP04234 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD3DP04234 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CD3DP04234 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD3DP04234 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD3DP04234 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms