Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV3P03979 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV3P03979 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRGV3P03979 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV3P03979 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRGV3P03979 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV3P03979 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.19■□□□□ 0.02
TRGV3P03979 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
TRGV3P03979 AL158211.5-201ENST00000623583 2518 ntBASIC15.19■□□□□ 0.02
TRGV3P03979 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV3P03979 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV3P03979 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV3P03979 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV3P03979 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV3P03979 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.19■□□□□ 0.02
TRGV3P03979 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV3P03979 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRGV3P03979 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.19■□□□□ 0.02
TRGV3P03979 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TRGV3P03979 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV3P03979 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.19■□□□□ 0.02
TRGV3P03979 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV3P03979 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV3P03979 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.19■□□□□ 0.02
TRGV3P03979 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.19■□□□□ 0.02
TRGV3P03979 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.19■□□□□ 0.02
TRGV3P03979 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV3P03979 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.19■□□□□ 0.02
TRGV3P03979 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRGV3P03979 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.19■□□□□ 0.02
TRGV3P03979 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC15.19■□□□□ 0.02
TRGV3P03979 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV3P03979 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
TRGV3P03979 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV3P03979 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV3P03979 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV3P03979 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC15.19■□□□□ 0.02
TRGV3P03979 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.19■□□□□ 0.02
TRGV3P03979 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.19■□□□□ 0.02
TRGV3P03979 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV3P03979 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC15.19■□□□□ 0.02
TRGV3P03979 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV3P03979 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRGV3P03979 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.19■□□□□ 0.02
TRGV3P03979 TREX1-205ENST00000625293 1783 ntBASIC15.19■□□□□ 0.02
TRGV3P03979 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TRGV3P03979 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV3P03979 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV3P03979 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV3P03979 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC15.18■□□□□ 0.02
TRGV3P03979 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV3P03979 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV3P03979 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV3P03979 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV3P03979 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV3P03979 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.18■□□□□ 0.02
TRGV3P03979 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC15.18■□□□□ 0.02
TRGV3P03979 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TRGV3P03979 AP002982.1-201ENST00000492365 877 ntBASIC15.18■□□□□ 0.02
TRGV3P03979 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV3P03979 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
TRGV3P03979 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.18■□□□□ 0.02
TRGV3P03979 C1QL1P1-201ENST00000568105 661 ntBASIC15.18■□□□□ 0.02
TRGV3P03979 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.18■□□□□ 0.02
TRGV3P03979 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.18■□□□□ 0.02
TRGV3P03979 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV3P03979 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV3P03979 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.18■□□□□ 0.02
TRGV3P03979 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC15.18■□□□□ 0.02
TRGV3P03979 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV3P03979 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV3P03979 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC15.18■□□□□ 0.02
TRGV3P03979 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TRGV3P03979 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.18■□□□□ 0.02
TRGV3P03979 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRGV3P03979 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV3P03979 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV3P03979 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRGV3P03979 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.17■□□□□ 0.02
TRGV3P03979 HTR7P1-201ENST00000538670 1336 ntBASIC15.17■□□□□ 0.02
TRGV3P03979 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TRGV3P03979 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRGV3P03979 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRGV3P03979 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV3P03979 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV3P03979 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV3P03979 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV3P03979 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV3P03979 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.17■□□□□ 0.02
TRGV3P03979 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.17■□□□□ 0.02
TRGV3P03979 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.17■□□□□ 0.02
TRGV3P03979 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV3P03979 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV3P03979 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV3P03979 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TRGV3P03979 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC15.17■□□□□ 0.02
TRGV3P03979 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRGV3P03979 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV3P03979 AL353807.1-201ENST00000427475 662 ntBASIC15.17■□□□□ 0.02
TRGV3P03979 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms