Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MT-ND3P03897 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MT-ND3P03897 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.64■□□□□ 0.73
MT-ND3P03897 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MT-ND3P03897 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MT-ND3P03897 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.64■□□□□ 0.73
MT-ND3P03897 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MT-ND3P03897 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.64■□□□□ 0.73
MT-ND3P03897 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.64■□□□□ 0.73
MT-ND3P03897 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MT-ND3P03897 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.64■□□□□ 0.73
MT-ND3P03897 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MT-ND3P03897 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MT-ND3P03897 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MT-ND3P03897 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
MT-ND3P03897 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MT-ND3P03897 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MT-ND3P03897 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MT-ND3P03897 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MT-ND3P03897 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MT-ND3P03897 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MT-ND3P03897 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.63■□□□□ 0.73
MT-ND3P03897 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MT-ND3P03897 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
MT-ND3P03897 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.63■□□□□ 0.73
MT-ND3P03897 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.63■□□□□ 0.73
MT-ND3P03897 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.63■□□□□ 0.73
MT-ND3P03897 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.63■□□□□ 0.73
MT-ND3P03897 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.63■□□□□ 0.73
MT-ND3P03897 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.63■□□□□ 0.73
MT-ND3P03897 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.63■□□□□ 0.73
MT-ND3P03897 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.63■□□□□ 0.73
MT-ND3P03897 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MT-ND3P03897 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.63■□□□□ 0.73
MT-ND3P03897 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
MT-ND3P03897 CYP2T3P-201ENST00000601990 817 ntBASIC19.63■□□□□ 0.73
MT-ND3P03897 AL589743.5-201ENST00000616611 1050 ntBASIC19.63■□□□□ 0.73
MT-ND3P03897 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MT-ND3P03897 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
MT-ND3P03897 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MT-ND3P03897 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
MT-ND3P03897 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
MT-ND3P03897 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MT-ND3P03897 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MT-ND3P03897 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
MT-ND3P03897 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
MT-ND3P03897 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
MT-ND3P03897 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MT-ND3P03897 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
MT-ND3P03897 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MT-ND3P03897 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MT-ND3P03897 ESRRAP1-201ENST00000400596 1257 ntBASIC19.62■□□□□ 0.73
MT-ND3P03897 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
MT-ND3P03897 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.62■□□□□ 0.73
MT-ND3P03897 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.62■□□□□ 0.73
MT-ND3P03897 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.62■□□□□ 0.73
MT-ND3P03897 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.62■□□□□ 0.73
MT-ND3P03897 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
MT-ND3P03897 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MT-ND3P03897 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MT-ND3P03897 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
MT-ND3P03897 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MT-ND3P03897 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MT-ND3P03897 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MT-ND3P03897 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MT-ND3P03897 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.61■□□□□ 0.73
MT-ND3P03897 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MT-ND3P03897 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.61■□□□□ 0.73
MT-ND3P03897 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MT-ND3P03897 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
MT-ND3P03897 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
MT-ND3P03897 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MT-ND3P03897 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MT-ND3P03897 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
MT-ND3P03897 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
MT-ND3P03897 AC008687.6-201ENST00000596318 630 ntBASIC19.61■□□□□ 0.73
MT-ND3P03897 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.61■□□□□ 0.73
MT-ND3P03897 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.61■□□□□ 0.73
MT-ND3P03897 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MT-ND3P03897 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MT-ND3P03897 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.61■□□□□ 0.73
MT-ND3P03897 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
MT-ND3P03897 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MT-ND3P03897 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MT-ND3P03897 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MT-ND3P03897 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
MT-ND3P03897 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.6■□□□□ 0.73
MT-ND3P03897 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
MT-ND3P03897 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MT-ND3P03897 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MT-ND3P03897 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
MT-ND3P03897 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
MT-ND3P03897 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MT-ND3P03897 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MT-ND3P03897 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MT-ND3P03897 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MT-ND3P03897 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MT-ND3P03897 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.6■□□□□ 0.73
MT-ND3P03897 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.6■□□□□ 0.73
MT-ND3P03897 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms