Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN11O75508 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CLDN11O75508 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN11O75508 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CLDN11O75508 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.76■□□□□ 0.75
CLDN11O75508 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CLDN11O75508 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN11O75508 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.75■□□□□ 0.75
CLDN11O75508 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN11O75508 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.75■□□□□ 0.75
CLDN11O75508 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN11O75508 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN11O75508 MMP23A-201ENST00000234610 1017 ntBASIC19.75■□□□□ 0.75
CLDN11O75508 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN11O75508 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN11O75508 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN11O75508 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN11O75508 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN11O75508 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.75■□□□□ 0.75
CLDN11O75508 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.75■□□□□ 0.75
CLDN11O75508 AC097488.1-201ENST00000507834 756 ntBASIC19.75■□□□□ 0.75
CLDN11O75508 AP005242.2-201ENST00000580065 1175 ntBASIC19.75■□□□□ 0.75
CLDN11O75508 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.75■□□□□ 0.75
CLDN11O75508 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.75■□□□□ 0.75
CLDN11O75508 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN11O75508 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN11O75508 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN11O75508 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CLDN11O75508 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CLDN11O75508 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN11O75508 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN11O75508 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN11O75508 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.75■□□□□ 0.75
CLDN11O75508 AL158211.5-201ENST00000623583 2518 ntBASIC19.74■□□□□ 0.75
CLDN11O75508 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN11O75508 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
CLDN11O75508 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN11O75508 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN11O75508 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN11O75508 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN11O75508 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN11O75508 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN11O75508 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN11O75508 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN11O75508 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN11O75508 MIR1238-201ENST00000408483 83 ntBASIC19.74■□□□□ 0.75
CLDN11O75508 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN11O75508 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CLDN11O75508 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN11O75508 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN11O75508 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN11O75508 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
CLDN11O75508 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CLDN11O75508 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CLDN11O75508 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.74■□□□□ 0.75
CLDN11O75508 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN11O75508 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.74■□□□□ 0.75
CLDN11O75508 SDHAP1-207ENST00000440850 2000 ntBASIC19.74■□□□□ 0.75
CLDN11O75508 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN11O75508 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN11O75508 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.74■□□□□ 0.75
CLDN11O75508 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN11O75508 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN11O75508 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN11O75508 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CLDN11O75508 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN11O75508 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
CLDN11O75508 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.73■□□□□ 0.75
CLDN11O75508 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN11O75508 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN11O75508 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.73■□□□□ 0.75
CLDN11O75508 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CLDN11O75508 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.73■□□□□ 0.75
CLDN11O75508 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN11O75508 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN11O75508 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CLDN11O75508 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN11O75508 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN11O75508 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.73■□□□□ 0.75
CLDN11O75508 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.73■□□□□ 0.75
CLDN11O75508 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.73■□□□□ 0.75
CLDN11O75508 SLC25A1P4-201ENST00000567977 778 ntBASIC19.73■□□□□ 0.75
CLDN11O75508 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN11O75508 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN11O75508 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN11O75508 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.73■□□□□ 0.75
CLDN11O75508 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN11O75508 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN11O75508 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CLDN11O75508 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.72■□□□□ 0.75
CLDN11O75508 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN11O75508 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN11O75508 AC096733.2-201ENST00000609937 1394 ntBASIC19.72■□□□□ 0.75
CLDN11O75508 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN11O75508 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN11O75508 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.72■□□□□ 0.75
CLDN11O75508 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.72■□□□□ 0.75
CLDN11O75508 AC087499.1-201ENST00000418141 1075 ntBASIC19.72■□□□□ 0.75
CLDN11O75508 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.72■□□□□ 0.75
CLDN11O75508 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms