Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CTNND1O60716 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CTNND1O60716 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CTNND1O60716 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.58■■□□□ 1.21
CTNND1O60716 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CTNND1O60716 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC22.58■■□□□ 1.21
CTNND1O60716 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC22.58■■□□□ 1.21
CTNND1O60716 AL671277.2-201ENST00000458060 996 ntBASIC22.58■■□□□ 1.21
CTNND1O60716 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC22.58■■□□□ 1.21
CTNND1O60716 ETFA-216ENST00000560726 942 ntTSL 3 BASIC22.58■■□□□ 1.21
CTNND1O60716 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC22.58■■□□□ 1.21
CTNND1O60716 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CTNND1O60716 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CTNND1O60716 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CTNND1O60716 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CTNND1O60716 AP005212.1-201ENST00000581547 1997 ntBASIC22.58■■□□□ 1.2
CTNND1O60716 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CTNND1O60716 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CTNND1O60716 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC22.57■■□□□ 1.2
CTNND1O60716 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CTNND1O60716 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
CTNND1O60716 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CTNND1O60716 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CTNND1O60716 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CTNND1O60716 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC22.57■■□□□ 1.2
CTNND1O60716 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC22.57■■□□□ 1.2
CTNND1O60716 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC22.57■■□□□ 1.2
CTNND1O60716 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC22.57■■□□□ 1.2
CTNND1O60716 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC22.57■■□□□ 1.2
CTNND1O60716 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
CTNND1O60716 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC22.57■■□□□ 1.2
CTNND1O60716 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CTNND1O60716 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC22.57■■□□□ 1.2
CTNND1O60716 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.57■■□□□ 1.2
CTNND1O60716 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
CTNND1O60716 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CTNND1O60716 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
CTNND1O60716 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC22.57■■□□□ 1.2
CTNND1O60716 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC22.57■■□□□ 1.2
CTNND1O60716 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CTNND1O60716 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
CTNND1O60716 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.56■■□□□ 1.2
CTNND1O60716 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC22.56■■□□□ 1.2
CTNND1O60716 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CTNND1O60716 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CTNND1O60716 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CTNND1O60716 AP000523.1-201ENST00000398242 1049 ntBASIC22.56■■□□□ 1.2
CTNND1O60716 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CTNND1O60716 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC22.56■■□□□ 1.2
CTNND1O60716 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC22.56■■□□□ 1.2
CTNND1O60716 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CTNND1O60716 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CTNND1O60716 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC22.56■■□□□ 1.2
CTNND1O60716 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CTNND1O60716 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CTNND1O60716 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC22.55■■□□□ 1.2
CTNND1O60716 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CTNND1O60716 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC22.55■■□□□ 1.2
CTNND1O60716 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC22.55■■□□□ 1.2
CTNND1O60716 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CTNND1O60716 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CTNND1O60716 IER3-202ENST00000376377 1350 ntBASIC22.55■■□□□ 1.2
CTNND1O60716 BET1L-202ENST00000332865 533 ntTSL 5 BASIC22.55■■□□□ 1.2
CTNND1O60716 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CTNND1O60716 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CTNND1O60716 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.55■■□□□ 1.2
CTNND1O60716 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
CTNND1O60716 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CTNND1O60716 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC22.55■■□□□ 1.2
CTNND1O60716 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC22.55■■□□□ 1.2
CTNND1O60716 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CTNND1O60716 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CTNND1O60716 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CTNND1O60716 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CTNND1O60716 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CTNND1O60716 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CTNND1O60716 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CTNND1O60716 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CTNND1O60716 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
CTNND1O60716 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CTNND1O60716 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CTNND1O60716 Telomerase-vert.1-201ENST00000363312 438 ntBASIC22.54■■□□□ 1.2
CTNND1O60716 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CTNND1O60716 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CTNND1O60716 DAP-202ENST00000432074 1048 ntTSL 2 BASIC22.54■■□□□ 1.2
CTNND1O60716 KRT18P38-201ENST00000449496 1282 ntBASIC22.54■■□□□ 1.2
CTNND1O60716 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC22.54■■□□□ 1.2
CTNND1O60716 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC22.54■■□□□ 1.2
CTNND1O60716 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC22.54■■□□□ 1.2
CTNND1O60716 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC22.54■■□□□ 1.2
CTNND1O60716 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC22.54■■□□□ 1.2
CTNND1O60716 NEK4P2-201ENST00000580004 1012 ntBASIC22.54■■□□□ 1.2
CTNND1O60716 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC22.54■■□□□ 1.2
CTNND1O60716 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC22.54■■□□□ 1.2
CTNND1O60716 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
CTNND1O60716 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CTNND1O60716 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CTNND1O60716 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CTNND1O60716 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC22.54■■□□□ 1.2
CTNND1O60716 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms