Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 AC010980.2-201ENST00000587099 1412 ntBASIC17.87■□□□□ 0.45
TNFRSF11BO00300 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.87■□□□□ 0.45
TNFRSF11BO00300 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TNFRSF11BO00300 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.87■□□□□ 0.45
TNFRSF11BO00300 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFRSF11BO00300 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.87■□□□□ 0.45
TNFRSF11BO00300 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFRSF11BO00300 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TNFRSF11BO00300 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.86■□□□□ 0.45
TNFRSF11BO00300 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFRSF11BO00300 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFRSF11BO00300 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.86■□□□□ 0.45
TNFRSF11BO00300 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.86■□□□□ 0.45
TNFRSF11BO00300 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFRSF11BO00300 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFRSF11BO00300 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFRSF11BO00300 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFRSF11BO00300 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
TNFRSF11BO00300 AC016769.1-201ENST00000409132 1010 ntBASIC17.86■□□□□ 0.45
TNFRSF11BO00300 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.86■□□□□ 0.45
TNFRSF11BO00300 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.86■□□□□ 0.45
TNFRSF11BO00300 AC011767.1-201ENST00000617410 1153 ntBASIC17.86■□□□□ 0.45
TNFRSF11BO00300 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TNFRSF11BO00300 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.86■□□□□ 0.45
TNFRSF11BO00300 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TNFRSF11BO00300 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TNFRSF11BO00300 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.86■□□□□ 0.45
TNFRSF11BO00300 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.86■□□□□ 0.45
TNFRSF11BO00300 TFP1-202ENST00000475455 1573 ntBASIC17.86■□□□□ 0.45
TNFRSF11BO00300 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFRSF11BO00300 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.86■□□□□ 0.45
TNFRSF11BO00300 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TNFRSF11BO00300 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFRSF11BO00300 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFRSF11BO00300 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.86■□□□□ 0.45
TNFRSF11BO00300 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.86■□□□□ 0.45
TNFRSF11BO00300 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
TNFRSF11BO00300 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 KRT17P1-201ENST00000399211 1546 ntBASIC17.85■□□□□ 0.45
TNFRSF11BO00300 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 AC079598.2-202ENST00000546624 1451 ntBASIC17.85■□□□□ 0.45
TNFRSF11BO00300 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFRSF11BO00300 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 WIZP1-201ENST00000531444 2299 ntBASIC17.84■□□□□ 0.45
TNFRSF11BO00300 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFRSF11BO00300 LETM1P2-201ENST00000597330 2178 ntBASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms