Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TCRBV5S1A1TA0A578 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TCRBV5S1A1TA0A578 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TCRBV5S1A1TA0A578 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.18■□□□□ 0.82
TCRBV5S1A1TA0A578 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TCRBV5S1A1TA0A578 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TCRBV5S1A1TA0A578 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TCRBV5S1A1TA0A578 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TCRBV5S1A1TA0A578 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TCRBV5S1A1TA0A578 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.17■□□□□ 0.82
TCRBV5S1A1TA0A578 NIFKP9-201ENST00000419265 221 ntBASIC20.17■□□□□ 0.82
TCRBV5S1A1TA0A578 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TCRBV5S1A1TA0A578 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.17■□□□□ 0.82
TCRBV5S1A1TA0A578 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.17■□□□□ 0.82
TCRBV5S1A1TA0A578 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.17■□□□□ 0.82
TCRBV5S1A1TA0A578 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.17■□□□□ 0.82
TCRBV5S1A1TA0A578 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TCRBV5S1A1TA0A578 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TCRBV5S1A1TA0A578 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TCRBV5S1A1TA0A578 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TCRBV5S1A1TA0A578 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.17■□□□□ 0.82
TCRBV5S1A1TA0A578 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TCRBV5S1A1TA0A578 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.17■□□□□ 0.82
TCRBV5S1A1TA0A578 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TCRBV5S1A1TA0A578 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TCRBV5S1A1TA0A578 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TCRBV5S1A1TA0A578 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.16■□□□□ 0.82
TCRBV5S1A1TA0A578 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TCRBV5S1A1TA0A578 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TCRBV5S1A1TA0A578 FEM1AP3-201ENST00000403722 1741 ntBASIC20.16■□□□□ 0.82
TCRBV5S1A1TA0A578 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.16■□□□□ 0.82
TCRBV5S1A1TA0A578 AC006333.2-201ENST00000607957 2099 ntBASIC20.16■□□□□ 0.82
TCRBV5S1A1TA0A578 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TCRBV5S1A1TA0A578 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TCRBV5S1A1TA0A578 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TCRBV5S1A1TA0A578 AC004980.1-204ENST00000429707 299 ntBASIC20.16■□□□□ 0.82
TCRBV5S1A1TA0A578 TSPY23P-201ENST00000440136 739 ntBASIC20.16■□□□□ 0.82
TCRBV5S1A1TA0A578 FAM201B-201ENST00000458407 597 ntBASIC20.16■□□□□ 0.82
TCRBV5S1A1TA0A578 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.16■□□□□ 0.82
TCRBV5S1A1TA0A578 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.16■□□□□ 0.82
TCRBV5S1A1TA0A578 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.16■□□□□ 0.82
TCRBV5S1A1TA0A578 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TCRBV5S1A1TA0A578 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
TCRBV5S1A1TA0A578 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
TCRBV5S1A1TA0A578 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.16■□□□□ 0.82
TCRBV5S1A1TA0A578 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TCRBV5S1A1TA0A578 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TCRBV5S1A1TA0A578 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TCRBV5S1A1TA0A578 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TCRBV5S1A1TA0A578 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.16■□□□□ 0.82
TCRBV5S1A1TA0A578 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TCRBV5S1A1TA0A578 CROCCP3-202ENST00000420820 1947 ntBASIC20.15■□□□□ 0.82
TCRBV5S1A1TA0A578 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
TCRBV5S1A1TA0A578 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TCRBV5S1A1TA0A578 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TCRBV5S1A1TA0A578 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.15■□□□□ 0.82
TCRBV5S1A1TA0A578 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TCRBV5S1A1TA0A578 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TCRBV5S1A1TA0A578 AC098590.1-201ENST00000468126 897 ntBASIC20.15■□□□□ 0.82
TCRBV5S1A1TA0A578 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TCRBV5S1A1TA0A578 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.15■□□□□ 0.82
TCRBV5S1A1TA0A578 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.15■□□□□ 0.82
TCRBV5S1A1TA0A578 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.15■□□□□ 0.82
TCRBV5S1A1TA0A578 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TCRBV5S1A1TA0A578 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.15■□□□□ 0.82
TCRBV5S1A1TA0A578 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.15■□□□□ 0.82
TCRBV5S1A1TA0A578 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.15■□□□□ 0.82
TCRBV5S1A1TA0A578 HTR7P1-201ENST00000538670 1336 ntBASIC20.15■□□□□ 0.82
TCRBV5S1A1TA0A578 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TCRBV5S1A1TA0A578 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TCRBV5S1A1TA0A578 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TCRBV5S1A1TA0A578 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.15■□□□□ 0.82
TCRBV5S1A1TA0A578 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TCRBV5S1A1TA0A578 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TCRBV5S1A1TA0A578 AC093503.3-201ENST00000624917 2352 ntBASIC20.15■□□□□ 0.82
TCRBV5S1A1TA0A578 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TCRBV5S1A1TA0A578 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TCRBV5S1A1TA0A578 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TCRBV5S1A1TA0A578 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
TCRBV5S1A1TA0A578 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
TCRBV5S1A1TA0A578 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TCRBV5S1A1TA0A578 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TCRBV5S1A1TA0A578 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TCRBV5S1A1TA0A578 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.14■□□□□ 0.81
TCRBV5S1A1TA0A578 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TCRBV5S1A1TA0A578 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.14■□□□□ 0.81
TCRBV5S1A1TA0A578 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TCRBV5S1A1TA0A578 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TCRBV5S1A1TA0A578 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TCRBV5S1A1TA0A578 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.14■□□□□ 0.81
TCRBV5S1A1TA0A578 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TCRBV5S1A1TA0A578 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TCRBV5S1A1TA0A578 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.14■□□□□ 0.81
TCRBV5S1A1TA0A578 RPS2P4-201ENST00000476944 856 ntBASIC20.14■□□□□ 0.81
TCRBV5S1A1TA0A578 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.14■□□□□ 0.81
TCRBV5S1A1TA0A578 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
TCRBV5S1A1TA0A578 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.14■□□□□ 0.81
TCRBV5S1A1TA0A578 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.14■□□□□ 0.81
TCRBV5S1A1TA0A578 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.14■□□□□ 0.81
TCRBV5S1A1TA0A578 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms