Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TRAV17A0A0B4J275 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV17A0A0B4J275 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV17A0A0B4J275 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
TRAV17A0A0B4J275 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV17A0A0B4J275 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRAV17A0A0B4J275 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV17A0A0B4J275 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAV17A0A0B4J275 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRAV17A0A0B4J275 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV17A0A0B4J275 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV17A0A0B4J275 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV17A0A0B4J275 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV17A0A0B4J275 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV17A0A0B4J275 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV17A0A0B4J275 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.48■□□□□ 0.39
TRAV17A0A0B4J275 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV17A0A0B4J275 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV17A0A0B4J275 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV17A0A0B4J275 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV17A0A0B4J275 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAV17A0A0B4J275 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV17A0A0B4J275 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAV17A0A0B4J275 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV17A0A0B4J275 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.48■□□□□ 0.39
TRAV17A0A0B4J275 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV17A0A0B4J275 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV17A0A0B4J275 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV17A0A0B4J275 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TRAV17A0A0B4J275 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV17A0A0B4J275 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV17A0A0B4J275 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV17A0A0B4J275 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV17A0A0B4J275 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV17A0A0B4J275 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV17A0A0B4J275 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV17A0A0B4J275 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV17A0A0B4J275 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV17A0A0B4J275 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV17A0A0B4J275 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.47■□□□□ 0.39
TRAV17A0A0B4J275 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV17A0A0B4J275 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.47■□□□□ 0.39
TRAV17A0A0B4J275 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.47■□□□□ 0.39
TRAV17A0A0B4J275 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.47■□□□□ 0.39
TRAV17A0A0B4J275 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRAV17A0A0B4J275 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV17A0A0B4J275 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV17A0A0B4J275 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.47■□□□□ 0.39
TRAV17A0A0B4J275 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRAV17A0A0B4J275 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV17A0A0B4J275 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TRAV17A0A0B4J275 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV17A0A0B4J275 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV17A0A0B4J275 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV17A0A0B4J275 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRAV17A0A0B4J275 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAV17A0A0B4J275 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV17A0A0B4J275 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV17A0A0B4J275 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.46■□□□□ 0.39
TRAV17A0A0B4J275 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.46■□□□□ 0.39
TRAV17A0A0B4J275 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
TRAV17A0A0B4J275 AL023973.1-201ENST00000624619 620 ntBASIC17.46■□□□□ 0.39
TRAV17A0A0B4J275 AL121956.5-201ENST00000625261 221 ntBASIC17.46■□□□□ 0.39
TRAV17A0A0B4J275 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRAV17A0A0B4J275 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAV17A0A0B4J275 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV17A0A0B4J275 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV17A0A0B4J275 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV17A0A0B4J275 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV17A0A0B4J275 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV17A0A0B4J275 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV17A0A0B4J275 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV17A0A0B4J275 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV17A0A0B4J275 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV17A0A0B4J275 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV17A0A0B4J275 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV17A0A0B4J275 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAV17A0A0B4J275 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.45■□□□□ 0.38
TRAV17A0A0B4J275 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV17A0A0B4J275 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV17A0A0B4J275 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.45■□□□□ 0.38
TRAV17A0A0B4J275 AC008622.2-201ENST00000617006 1229 ntBASIC17.45■□□□□ 0.38
TRAV17A0A0B4J275 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAV17A0A0B4J275 AP000550.4-202ENST00000639755 178 ntBASIC17.45■□□□□ 0.38
TRAV17A0A0B4J275 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV17A0A0B4J275 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV17A0A0B4J275 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV17A0A0B4J275 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV17A0A0B4J275 KRT8P45-201ENST00000414328 1447 ntBASIC17.45■□□□□ 0.38
TRAV17A0A0B4J275 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV17A0A0B4J275 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV17A0A0B4J275 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV17A0A0B4J275 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TRAV17A0A0B4J275 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV17A0A0B4J275 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TRAV17A0A0B4J275 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV17A0A0B4J275 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV17A0A0B4J275 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV17A0A0B4J275 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV17A0A0B4J275 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms