Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
TRAV13-1A0A0B4J241 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
TRAV13-1A0A0B4J241 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
TRAV13-1A0A0B4J241 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
TRAV13-1A0A0B4J241 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV13-1A0A0B4J241 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
TRAV13-1A0A0B4J241 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV13-1A0A0B4J241 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV13-1A0A0B4J241 OR6D1P-203ENST00000641209 4860 ntBASIC13.46□□□□□ -0.25
TRAV13-1A0A0B4J241 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV13-1A0A0B4J241 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
TRAV13-1A0A0B4J241 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV13-1A0A0B4J241 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV13-1A0A0B4J241 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV13-1A0A0B4J241 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV13-1A0A0B4J241 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV13-1A0A0B4J241 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV13-1A0A0B4J241 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC13.46□□□□□ -0.25
TRAV13-1A0A0B4J241 KRT18P61-201ENST00000585825 1298 ntBASIC13.46□□□□□ -0.25
TRAV13-1A0A0B4J241 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV13-1A0A0B4J241 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV13-1A0A0B4J241 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
TRAV13-1A0A0B4J241 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAV13-1A0A0B4J241 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV13-1A0A0B4J241 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV13-1A0A0B4J241 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV13-1A0A0B4J241 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV13-1A0A0B4J241 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV13-1A0A0B4J241 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC13.46□□□□□ -0.26
TRAV13-1A0A0B4J241 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV13-1A0A0B4J241 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV13-1A0A0B4J241 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV13-1A0A0B4J241 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV13-1A0A0B4J241 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC13.46□□□□□ -0.26
TRAV13-1A0A0B4J241 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 KRT18P68-201ENST00000392293 1000 ntBASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 LGR4-203ENST00000480977 492 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 NTF6G-201ENST00000591094 616 ntBASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 AC105020.6-201ENST00000621523 1217 ntBASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV13-1A0A0B4J241 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 UQCRFS1P1-201ENST00000435169 820 ntBASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 AC007322.4-201ENST00000509611 723 ntBASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 RARRES2P4-201ENST00000514074 484 ntBASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 SPI1-203ENST00000533030 661 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms