Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 MYC-209ENST00000641252 345 ntBASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV5-3A0A0A0MS03 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRBV5-3A0A0A0MS03 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV5-3A0A0A0MS03 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV5-3A0A0A0MS03 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV5-3A0A0A0MS03 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV5-3A0A0A0MS03 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV5-3A0A0A0MS03 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TRBV5-3A0A0A0MS03 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV5-3A0A0A0MS03 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV5-3A0A0A0MS03 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV5-3A0A0A0MS03 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.1■□□□□ 0.49
TRBV5-3A0A0A0MS03 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV5-3A0A0A0MS03 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.1■□□□□ 0.49
TRBV5-3A0A0A0MS03 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
TRBV5-3A0A0A0MS03 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV5-3A0A0A0MS03 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV5-3A0A0A0MS03 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV5-3A0A0A0MS03 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV5-3A0A0A0MS03 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.1■□□□□ 0.49
TRBV5-3A0A0A0MS03 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV5-3A0A0A0MS03 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV5-3A0A0A0MS03 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.1■□□□□ 0.49
TRBV5-3A0A0A0MS03 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-3A0A0A0MS03 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-3A0A0A0MS03 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-3A0A0A0MS03 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TRBV5-3A0A0A0MS03 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-3A0A0A0MS03 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-3A0A0A0MS03 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-3A0A0A0MS03 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TRBV5-3A0A0A0MS03 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-3A0A0A0MS03 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-3A0A0A0MS03 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-3A0A0A0MS03 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-3A0A0A0MS03 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-3A0A0A0MS03 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRBV5-3A0A0A0MS03 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-3A0A0A0MS03 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.09■□□□□ 0.49
TRBV5-3A0A0A0MS03 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
TRBV5-3A0A0A0MS03 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-3A0A0A0MS03 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.09■□□□□ 0.49
TRBV5-3A0A0A0MS03 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRBV5-3A0A0A0MS03 HLA-B-256ENST00000639848 1089 ntBASIC18.09■□□□□ 0.49
TRBV5-3A0A0A0MS03 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TRBV5-3A0A0A0MS03 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-3A0A0A0MS03 BICD1-207ENST00000551848 1962 ntBASIC18.09■□□□□ 0.49
TRBV5-3A0A0A0MS03 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-3A0A0A0MS03 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TRBV5-3A0A0A0MS03 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV5-3A0A0A0MS03 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.09■□□□□ 0.49
TRBV5-3A0A0A0MS03 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRBV5-3A0A0A0MS03 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.08■□□□□ 0.49
TRBV5-3A0A0A0MS03 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRBV5-3A0A0A0MS03 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
TRBV5-3A0A0A0MS03 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRBV5-3A0A0A0MS03 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
TRBV5-3A0A0A0MS03 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
TRBV5-3A0A0A0MS03 AL390961.4-201ENST00000623958 2535 ntBASIC18.08■□□□□ 0.49
TRBV5-3A0A0A0MS03 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRBV5-3A0A0A0MS03 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRBV5-3A0A0A0MS03 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV5-3A0A0A0MS03 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.08■□□□□ 0.48
TRBV5-3A0A0A0MS03 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TRBV5-3A0A0A0MS03 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV5-3A0A0A0MS03 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.08■□□□□ 0.48
TRBV5-3A0A0A0MS03 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.08■□□□□ 0.48
TRBV5-3A0A0A0MS03 AC083906.2-201ENST00000511578 360 ntBASIC18.08■□□□□ 0.48
TRBV5-3A0A0A0MS03 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.08■□□□□ 0.48
TRBV5-3A0A0A0MS03 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.08■□□□□ 0.48
TRBV5-3A0A0A0MS03 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.08■□□□□ 0.48
TRBV5-3A0A0A0MS03 AL121832.2-201ENST00000610979 668 ntBASIC18.08■□□□□ 0.48
TRBV5-3A0A0A0MS03 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.08■□□□□ 0.48
TRBV5-3A0A0A0MS03 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.08■□□□□ 0.48
TRBV5-3A0A0A0MS03 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV5-3A0A0A0MS03 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV5-3A0A0A0MS03 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV5-3A0A0A0MS03 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
TRBV5-3A0A0A0MS03 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV5-3A0A0A0MS03 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
TRBV5-3A0A0A0MS03 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV5-3A0A0A0MS03 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV5-3A0A0A0MS03 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TRBV5-3A0A0A0MS03 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms