Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC187A0A096LP49 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC187A0A096LP49 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC187A0A096LP49 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC187A0A096LP49 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC187A0A096LP49 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC187A0A096LP49 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC187A0A096LP49 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC187A0A096LP49 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC187A0A096LP49 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC187A0A096LP49 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC187A0A096LP49 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CCDC187A0A096LP49 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC187A0A096LP49 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC187A0A096LP49 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC187A0A096LP49 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.3■□□□□ 0.52
CCDC187A0A096LP49 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC187A0A096LP49 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC187A0A096LP49 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC187A0A096LP49 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC187A0A096LP49 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.3■□□□□ 0.52
CCDC187A0A096LP49 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.3■□□□□ 0.52
CCDC187A0A096LP49 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC187A0A096LP49 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC187A0A096LP49 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC187A0A096LP49 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC187A0A096LP49 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC187A0A096LP49 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC187A0A096LP49 SLC25A24-204ENST00000569674 2357 ntBASIC18.3■□□□□ 0.52
CCDC187A0A096LP49 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC187A0A096LP49 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC187A0A096LP49 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC187A0A096LP49 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC187A0A096LP49 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC187A0A096LP49 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC187A0A096LP49 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC187A0A096LP49 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC187A0A096LP49 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC187A0A096LP49 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC187A0A096LP49 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CCDC187A0A096LP49 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.29■□□□□ 0.52
CCDC187A0A096LP49 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCDC187A0A096LP49 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.29■□□□□ 0.52
CCDC187A0A096LP49 DUSP5P1-201ENST00000441325 1139 ntBASIC18.29■□□□□ 0.52
CCDC187A0A096LP49 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC187A0A096LP49 AC112907.2-201ENST00000448639 330 ntBASIC18.29■□□□□ 0.52
CCDC187A0A096LP49 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC187A0A096LP49 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC187A0A096LP49 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC187A0A096LP49 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CCDC187A0A096LP49 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC187A0A096LP49 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCDC187A0A096LP49 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC187A0A096LP49 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC187A0A096LP49 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC187A0A096LP49 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCDC187A0A096LP49 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 AL450487.1-201ENST00000426799 995 ntBASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 TPM4P1-201ENST00000436100 807 ntBASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 ZNF444P1-201ENST00000559497 298 ntBASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC187A0A096LP49 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC187A0A096LP49 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC187A0A096LP49 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC187A0A096LP49 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC187A0A096LP49 KRT8P11-201ENST00000409686 1436 ntBASIC18.27■□□□□ 0.52
CCDC187A0A096LP49 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC187A0A096LP49 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC187A0A096LP49 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC187A0A096LP49 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC187A0A096LP49 STARP1-201ENST00000397973 869 ntBASIC18.27■□□□□ 0.52
CCDC187A0A096LP49 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms