Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AC090197.1-202ENST00000519692 4374 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 ACLY-201ENST00000352035 4339 ntAPPRIS P4 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF197-205ENST00000396058 4299 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 DPF3-216ENST00000614862 4221 ntTSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 STAG3-219ENST00000620100 4203 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC006213.6-201ENST00000623722 4179 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 WRAP53-201ENST00000316024 4011 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 SKAP2-201ENST00000345317 3998 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 HAUS6-201ENST00000380496 3756 ntTSL 2 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 LRRC37A11P-202ENST00000579258 3717 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC139099.4-201ENST00000625083 3504 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 HLA-DOA-201ENST00000229829 3489 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 SCMH1-206ENST00000372596 3323 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 TIAM2-210ENST00000528391 3349 ntTSL 2 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF300-201ENST00000274599 3268 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 RRM2-201ENST00000304567 3271 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 TDG-202ENST00000392872 3251 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 TNPO3-203ENST00000471234 3283 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AL445437.1-201ENST00000623157 3087 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 KIF2C-201ENST00000372217 2955 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 MEIS1-216ENST00000560281 2773 ntTSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 ELP2-205ENST00000442325 2722 ntTSL 2 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 ABLIM1-201ENST00000277895 2657 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 CLEC1A-201ENST00000315330 2685 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 LINC01426-202ENST00000420877 2632 ntTSL 2 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 LINC00284-202ENST00000439707 2521 ntTSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 MUSK-201ENST00000189978 2408 ntTSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 MUSK-204ENST00000374440 2408 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 NCOA4-201ENST00000578454 2307 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 ABLIM1-205ENST00000369266 2230 ntTSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 MAPK10-368ENST00000641911 2238 ntAPPRIS P2 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 HSP90AA2P-201ENST00000530115 2196 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC098864.1-202ENST00000507869 2129 ntTSL 2 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 ZSCAN26-207ENST00000623276 1998 ntAPPRIS P2 TSL 3 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 CDH7-202ENST00000397968 12231 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 TUBAP2-201ENST00000530835 1613 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 DIAPH1-211ENST00000518047 4668 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 ATP7B-205ENST00000418097 4340 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 FGFR2-206ENST00000358487 4255 ntAPPRIS ALT1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 TSPAN18-201ENST00000340160 4229 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 SPIN4-201ENST00000374884 4117 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AL357556.1-201ENST00000421884 1388 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC106800.1-201ENST00000501221 1362 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 HNRNPA1-203ENST00000546500 4121 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 STAT6-201ENST00000300134 4034 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC008938.1-201ENST00000566929 6510 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 ELOB-201ENST00000262306 582 ntTSL 2 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 EMP3-201ENST00000270221 876 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 OR3A3-201ENST00000291231 966 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 ARL17A-201ENST00000329240 543 ntAPPRIS ALT2 TSL 4 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 RNU6-838P-201ENST00000363399 108 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 RNU4-67P-201ENST00000364569 141 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 RNU6-1335P-201ENST00000365426 107 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 RBMX2-202ENST00000370947 798 ntTSL 2 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 LCN1P1-201ENST00000372031 505 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 C22orf15-202ENST00000382821 646 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 Y_RNA.456-201ENST00000384232 111 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 MIR635-201ENST00000384830 98 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 MIR605-201ENST00000385078 83 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 TRBV5-6-201ENST00000390375 384 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 TRBV5-1-201ENST00000390381 652 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 Y_RNA.587-201ENST00000391210 103 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 CES5AP1-201ENST00000400418 859 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 MIR941-2-201ENST00000401322 72 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 MIR941-4-201ENST00000401376 72 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AL391361.1-201ENST00000405580 489 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC009494.1-201ENST00000406090 455 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AL136968.2-201ENST00000407959 354 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 MIR1272-201ENST00000408106 129 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 MIR1236-201ENST00000408340 102 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 U3.40-201ENST00000408706 208 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 RIMKLBP1-201ENST00000408914 1164 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 RN7SKP54-201ENST00000410704 269 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 RN7SKP101-201ENST00000411376 320 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC074117.2-201ENST00000417130 397 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 FAM213AP1-201ENST00000418757 668 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AL031733.1-201ENST00000422817 455 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC008753.1-201ENST00000423096 284 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 KRTAP8-3P-201ENST00000423658 188 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 220.4 ms