RNA–Protein interactions for RNA: ENST00000392872.7

TDG-202, Transcript of thymine DNA glycosylase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDG, Length 3,251 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDG-202ENST00000392872 NISCHQ9Y2I1 1504 aa17.65■□□□□ 0.42
TDG-202ENST00000392872 SHROOM4Q9ULL8 1493 aa16.11■□□□□ 0.17
TDG-202ENST00000392872 SUPT5HO00267 1087 aaKnown RBP16.05■□□□□ 0.16
TDG-202ENST00000392872 PCGF6Q9BYE7 350 aa15.66■□□□□ 0.1
TDG-202ENST00000392872 HRCP23327 699 aa15.62■□□□□ 0.09
TDG-202ENST00000392872 CCDC180Q9P1Z9 1646 aa15.58■□□□□ 0.08
TDG-202ENST00000392872 DCAF8L2P0C7V8 631 aa15.56■□□□□ 0.08
TDG-202ENST00000392872 PPARGC1BQ86YN6 1023 aaKnown RBP15.53■□□□□ 0.08
TDG-202ENST00000392872 CHIC1Q5VXU3 224 aa15.41■□□□□ 0.06
TDG-202ENST00000392872 MYO15BQ96JP2 1530 aa15.32■□□□□ 0.04
TDG-202ENST00000392872 LOC105371045A0A1W2PR82 267 aa15.24■□□□□ 0.03
TDG-202ENST00000392872 ABCC9O60706 1549 aa15.06■□□□□ 0
TDG-202ENST00000392872 EHMT2Q96KQ7 1210 aa15.06■□□□□ 0
TDG-202ENST00000392872 TRIM26Q12899 539 aaPredicted RBP14.98□□□□□ -0.01
TDG-202ENST00000392872 FAM9AQ8IZU1 332 aaPredicted RBP14.93□□□□□ -0.02
TDG-202ENST00000392872 ZCCHC6Q5VYS8 1495 aaKnown RBP14.92□□□□□ -0.02
TDG-202ENST00000392872 DCAF1Q9Y4B6 1507 aa14.82□□□□□ -0.04
TDG-202ENST00000392872 PELP1Q8IZL8 1130 aaKnown RBP14.76□□□□□ -0.05
TDG-202ENST00000392872 ZEB1P37275 1124 aaPredicted RBP14.76□□□□□ -0.05
TDG-202ENST00000392872 SCAF1Q9H7N4 1312 aaKnown RBP14.73□□□□□ -0.05
TDG-202ENST00000392872 TRIM41Q8WV44 630 aa14.73□□□□□ -0.05
TDG-202ENST00000392872 NACADO15069 1562 aa14.64□□□□□ -0.07
TDG-202ENST00000392872 RB1CC1Q8TDY2 1594 aa14.64□□□□□ -0.07
TDG-202ENST00000392872 TTBK1Q5TCY1 1321 aaPredicted RBP14.63□□□□□ -0.07
TDG-202ENST00000392872 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.57□□□□□ -0.08
TDG-202ENST00000392872 CCER1Q8TC90 406 aaPredicted RBP14.56□□□□□ -0.08
TDG-202ENST00000392872 NEUROD1Q13562 356 aa14.46□□□□□ -0.09
TDG-202ENST00000392872 GTF3C3Q9Y5Q9 886 aa14.44□□□□□ -0.1
TDG-202ENST00000392872 ACIN1Q9UKV3 1341 aaKnown RBP14.43□□□□□ -0.1
TDG-202ENST00000392872 CENPBP07199 599 aaPredicted RBP14.39□□□□□ -0.11
TDG-202ENST00000392872 YTHDC1Q96MU7 727 aaKnown RBP14.39□□□□□ -0.11
TDG-202ENST00000392872 DIEXFQ68CQ4 756 aaKnown RBP14.38□□□□□ -0.11
TDG-202ENST00000392872 UNC13AQ9UPW8 1703 aa14.28□□□□□ -0.12
TDG-202ENST00000392872 RSF1Q96T23 1441 aaPredicted RBP14.26□□□□□ -0.13
TDG-202ENST00000392872 BICRAQ9NZM4 1560 aa14.19□□□□□ -0.14
TDG-202ENST00000392872 SCRIBQ14160 1630 aa14.17□□□□□ -0.14
TDG-202ENST00000392872 UBTFP17480 764 aaKnown RBP14.11□□□□□ -0.15
TDG-202ENST00000392872 MYT1Q01538 1121 aa14.09□□□□□ -0.15
TDG-202ENST00000392872 HNRNPUL2Q1KMD3 747 aaKnown RBP14.08□□□□□ -0.16
TDG-202ENST00000392872 ZNF316A6NFI3 1004 aaPredicted RBP14.06□□□□□ -0.16
TDG-202ENST00000392872 RANGAP1P46060 587 aaPredicted RBP14.05□□□□□ -0.16
TDG-202ENST00000392872 MIER1Q8N108 512 aa14.01□□□□□ -0.17
TDG-202ENST00000392872 CECR2Q9BXF3 1484 aa13.98□□□□□ -0.17
TDG-202ENST00000392872 PABPN1Q86U42 306 aaKnown RBP eCLIP13.96□□□□□ -0.18
TDG-202ENST00000392872 DNAJC5BQ9UF47 199 aa13.95□□□□□ -0.18
TDG-202ENST00000392872 APLP2Q06481 763 aa13.89□□□□□ -0.19
TDG-202ENST00000392872 CEP162Q5TB80 1403 aa13.87□□□□□ -0.19
TDG-202ENST00000392872 MROH2BQ7Z745 1585 aa13.87□□□□□ -0.19
TDG-202ENST00000392872 CSRNP3Q8WYN3 585 aa13.83□□□□□ -0.2
TDG-202ENST00000392872 SOGA1O94964 1423 aa13.79□□□□□ -0.2
TDG-202ENST00000392872 WIZO95785 1651 aa13.79□□□□□ -0.2
TDG-202ENST00000392872 EIF4G1Q04637 1599 aaKnown RBP13.79□□□□□ -0.2
TDG-202ENST00000392872 CCDC88BA6NC98 1476 aa13.79□□□□□ -0.2
TDG-202ENST00000392872 ABCC8Q09428 1581 aa13.79□□□□□ -0.2
TDG-202ENST00000392872 CC2D2AQ9P2K1 1620 aa13.75□□□□□ -0.21
TDG-202ENST00000392872 BCANQ96GW7 911 aa13.72□□□□□ -0.21
TDG-202ENST00000392872 TNIKQ9UKE5 1360 aa13.71□□□□□ -0.22
TDG-202ENST00000392872 ITGAEP38570 1179 aa13.69□□□□□ -0.22
TDG-202ENST00000392872 RUSC2Q8N2Y8 1516 aa13.69□□□□□ -0.22
TDG-202ENST00000392872 WRNQ14191 1432 aaPredicted RBP eCLIP13.68□□□□□ -0.22
TDG-202ENST00000392872 SUPT16HQ9Y5B9 1047 aaKnown RBP13.66□□□□□ -0.22
TDG-202ENST00000392872 GOLGA3Q08378 1498 aa13.57□□□□□ -0.24
TDG-202ENST00000392872 CLIP1P30622 1438 aa13.57□□□□□ -0.24
TDG-202ENST00000392872 TSHZ2Q9NRE2 1034 aa13.54□□□□□ -0.24
TDG-202ENST00000392872 BAZ1AQ9NRL2 1556 aaPredicted RBP13.53□□□□□ -0.24
TDG-202ENST00000392872 KCNH8Q96L42 1107 aa13.53□□□□□ -0.24
TDG-202ENST00000392872 FKBP8Q14318 412 aa13.5□□□□□ -0.25
TDG-202ENST00000392872 EEA1Q15075 1411 aa13.49□□□□□ -0.25
TDG-202ENST00000392872 ANP32EQ9BTT0 268 aa13.49□□□□□ -0.25
TDG-202ENST00000392872 NCAPD3P42695 1498 aa13.48□□□□□ -0.25
TDG-202ENST00000392872 NEFLP07196 543 aa13.46□□□□□ -0.25
TDG-202ENST00000392872 DDX10Q13206 875 aaKnown RBP13.45□□□□□ -0.26
TDG-202ENST00000392872 PEG3Q9GZU2 1588 aa13.45□□□□□ -0.26
TDG-202ENST00000392872 HIRIP3Q9BW71 556 aaPredicted RBP13.45□□□□□ -0.26
TDG-202ENST00000392872 SMARCA4P51532 1647 aa13.44□□□□□ -0.26
TDG-202ENST00000392872 CLSPNQ9HAW4 1339 aa13.43□□□□□ -0.26
TDG-202ENST00000392872 VPS8Q8N3P4 1428 aa13.43□□□□□ -0.26
TDG-202ENST00000392872 KANK4Q5T7N3 995 aaPredicted RBP13.43□□□□□ -0.26
TDG-202ENST00000392872 TOP2AP11388 1531 aaKnown RBP13.43□□□□□ -0.26
TDG-202ENST00000392872 HMGXB3Q12766 1538 aa13.43□□□□□ -0.26
TDG-202ENST00000392872 SMARCA2P51531 1590 aa13.43□□□□□ -0.26
TDG-202ENST00000392872 CEP164Q9UPV0 1460 aa13.42□□□□□ -0.26
TDG-202ENST00000392872 TRIM52Q96A61 297 aa13.42□□□□□ -0.26
TDG-202ENST00000392872 ATP1B4Q9UN42 357 aaPredicted RBP13.42□□□□□ -0.26
TDG-202ENST00000392872 DHX57Q6P158 1386 aaKnown RBP13.41□□□□□ -0.26
TDG-202ENST00000392872 ATAD2BQ9ULI0 1458 aa13.39□□□□□ -0.27
TDG-202ENST00000392872 BCL11AQ9H165 835 aa13.38□□□□□ -0.27
TDG-202ENST00000392872 RAPGEF2Q9Y4G8 1499 aa13.37□□□□□ -0.27
TDG-202ENST00000392872 FAM50AQ14320 339 aaKnown RBP13.33□□□□□ -0.27
TDG-202ENST00000392872 SIN3AQ96ST3 1273 aa13.32□□□□□ -0.28
TDG-202ENST00000392872 ERICH6Q7L0X2 663 aa13.31□□□□□ -0.28
TDG-202ENST00000392872 RBM19Q9Y4C8 960 aaKnown RBP13.3□□□□□ -0.28
TDG-202ENST00000392872 IRX6P78412 446 aaPredicted RBP13.29□□□□□ -0.28
TDG-202ENST00000392872 ANP32CO43423 234 aa13.27□□□□□ -0.29
TDG-202ENST00000392872 KIF21BO75037 1637 aa13.25□□□□□ -0.29
TDG-202ENST00000392872 SYNJ1O43426 1573 aa13.24□□□□□ -0.29
TDG-202ENST00000392872 P3H3Q8IVL6 736 aa13.24□□□□□ -0.29
TDG-202ENST00000392872 BAZ1BQ9UIG0 1483 aaKnown RBP13.23□□□□□ -0.29
TDG-202ENST00000392872 CCNB3Q8WWL7 1395 aa13.22□□□□□ -0.29
TDG-202ENST00000392872 RAB3GAP2Q9H2M9 1393 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms