RNA–Protein interactions for RNA: ENST00000408706.2

U3.40-201, humanhuman

BASIC

Gene U3, Length 208 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U3.40-201ENST00000408706 AEBP2Q6ZN18 517 aaPredicted RBP13.19□□□□□ -0.3
U3.40-201ENST00000408706 CHIC1Q5VXU3 224 aa12.69□□□□□ -0.38
U3.40-201ENST00000408706 SENP3Q9H4L4 574 aaPredicted RBP11.24□□□□□ -0.61
U3.40-201ENST00000408706 PHF23Q9BUL5 403 aaPredicted RBP11.14□□□□□ -0.63
U3.40-201ENST00000408706 FOXD1Q16676 465 aa10.45□□□□□ -0.74
U3.40-201ENST00000408706 PLPPR3Q6T4P5 718 aa10.22□□□□□ -0.77
U3.40-201ENST00000408706 PPP6R1Q9UPN7 881 aa9.9□□□□□ -0.82
U3.40-201ENST00000408706 ADRA2BP18089 450 aa9.89□□□□□ -0.83
U3.40-201ENST00000408706 PIAS4Q8N2W9 510 aaPredicted RBP9.81□□□□□ -0.84
U3.40-201ENST00000408706 MSH5O43196 834 aa9.72□□□□□ -0.85
U3.40-201ENST00000408706 POTEDQ86YR6 584 aa9.19□□□□□ -0.94
U3.40-201ENST00000408706 SCAF1Q9H7N4 1312 aaKnown RBP9.06□□□□□ -0.96
U3.40-201ENST00000408706 MAPK8IP2Q13387 824 aaPredicted RBP9.03□□□□□ -0.96
U3.40-201ENST00000408706 PPP4R3CPQ6ZMV5 832 aa8.98□□□□□ -0.97
U3.40-201ENST00000408706 DMRT2Q9Y5R5 561 aa8.94□□□□□ -0.98
U3.40-201ENST00000408706 CNKSR2Q8WXI2 1034 aa8.78□□□□□ -1
U3.40-201ENST00000408706 NCBP3Q53F19 620 aaKnown RBP8.71□□□□□ -1.02
U3.40-201ENST00000408706 HOXD11P31277 338 aaPredicted RBP8.67□□□□□ -1.02
U3.40-201ENST00000408706 RNF216Q9NWF9 866 aaPredicted RBP8.65□□□□□ -1.02
U3.40-201ENST00000408706 DCAF8L1A6NGE4 600 aa8.57□□□□□ -1.04
U3.40-201ENST00000408706 NPM3O75607 178 aaKnown RBP8.56□□□□□ -1.04
U3.40-201ENST00000408706 KCNA4P22459 653 aa8.55□□□□□ -1.04
U3.40-201ENST00000408706 DNAJC5BQ9UF47 199 aa8.35□□□□□ -1.07
U3.40-201ENST00000408706 RNF39Q9H2S5 420 aa8.31□□□□□ -1.08
U3.40-201ENST00000408706 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.29□□□□□ -1.08
U3.40-201ENST00000408706 CACNB1Q02641 598 aaPredicted RBP8.25□□□□□ -1.09
U3.40-201ENST00000408706 C1QBPQ07021 282 aaKnown RBP8.21□□□□□ -1.1
U3.40-201ENST00000408706 SLC4A2P04920 1241 aa8.13□□□□□ -1.11
U3.40-201ENST00000408706 SLC4A1APQ9BWU0 796 aaKnown RBP8.11□□□□□ -1.11
U3.40-201ENST00000408706 U3KPZ7 1027 aaPredicted RBP8.1□□□□□ -1.11
U3.40-201ENST00000408706 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.95□□□□□ -1.14
U3.40-201ENST00000408706 HNRNPUL2Q1KMD3 747 aaKnown RBP7.95□□□□□ -1.14
U3.40-201ENST00000408706 CAPN15O75808 1086 aa7.93□□□□□ -1.14
U3.40-201ENST00000408706 SPINK5Q9NQ38 1064 aaPredicted RBP7.93□□□□□ -1.14
U3.40-201ENST00000408706 APLP2Q06481 763 aa7.92□□□□□ -1.14
U3.40-201ENST00000408706 SAMD1Q6SPF0 538 aaPredicted RBP7.92□□□□□ -1.14
U3.40-201ENST00000408706 FOXD4L1Q9NU39 408 aa7.92□□□□□ -1.14
U3.40-201ENST00000408706 MYCNP04198 464 aaPredicted RBP7.91□□□□□ -1.14
U3.40-201ENST00000408706 ZBTB22O15209 634 aa7.85□□□□□ -1.15
U3.40-201ENST00000408706 TRHP20396 242 aaPredicted RBP7.84□□□□□ -1.15
U3.40-201ENST00000408706 DSG3P32926 999 aa7.83□□□□□ -1.16
U3.40-201ENST00000408706 ZNF219Q9P2Y4 722 aaPredicted RBP7.83□□□□□ -1.16
U3.40-201ENST00000408706 ABCB7O75027 752 aa7.76□□□□□ -1.17
U3.40-201ENST00000408706 ATF5Q9Y2D1 282 aaPredicted RBP7.71□□□□□ -1.18
U3.40-201ENST00000408706 ATXN8OSP0DMR3 200 aa7.68□□□□□ -1.18
U3.40-201ENST00000408706 POLA2Q14181 598 aa7.68□□□□□ -1.18
U3.40-201ENST00000408706 CSRNP3Q8WYN3 585 aa7.65□□□□□ -1.18
U3.40-201ENST00000408706 EHMT2Q96KQ7 1210 aa7.64□□□□□ -1.19
U3.40-201ENST00000408706 ZBTB12Q9Y330 459 aaPredicted RBP7.53□□□□□ -1.2
U3.40-201ENST00000408706 RBM42Q9BTD8 480 aaKnown RBP7.47□□□□□ -1.21
U3.40-201ENST00000408706 FBLN2P98095 1184 aa7.43□□□□□ -1.22
U3.40-201ENST00000408706 OSCARQ8IYS5 282 aa7.4□□□□□ -1.22
U3.40-201ENST00000408706 MKRN4PQ13434 485 aaPredicted RBP7.37□□□□□ -1.23
U3.40-201ENST00000408706 AKT1S1Q96B36 256 aa7.35□□□□□ -1.23
U3.40-201ENST00000408706 SPDYE2BA6NHP3 402 aa7.31□□□□□ -1.24
U3.40-201ENST00000408706 SPDYE6P0CI01 402 aa7.31□□□□□ -1.24
U3.40-201ENST00000408706 SPDYE2Q495Y8 402 aa7.31□□□□□ -1.24
U3.40-201ENST00000408706 REM2Q8IYK8 340 aaPredicted RBP7.28□□□□□ -1.24
U3.40-201ENST00000408706 CHRDL2Q6WN34 429 aa7.25□□□□□ -1.25
U3.40-201ENST00000408706 ZNF692Q9BU19 519 aaPredicted RBP7.25□□□□□ -1.25
U3.40-201ENST00000408706 POTEHQ6S545 545 aa7.24□□□□□ -1.25
U3.40-201ENST00000408706 SSUH2Q9Y2M2 353 aa7.22□□□□□ -1.25
U3.40-201ENST00000408706 PITPNM1O00562 1244 aa7.19□□□□□ -1.26
U3.40-201ENST00000408706 SPDYE1Q8NFV5 336 aaPredicted RBP7.15□□□□□ -1.26
U3.40-201ENST00000408706 PABPN1Q86U42 306 aaKnown RBP eCLIP7.14□□□□□ -1.27
U3.40-201ENST00000408706 SPDYE4A6NLX3 237 aa7.12□□□□□ -1.27
U3.40-201ENST00000408706 CLEC11AQ9Y240 323 aa7.12□□□□□ -1.27
U3.40-201ENST00000408706 PIP4P2Q8N4L2 257 aa7.11□□□□□ -1.27
U3.40-201ENST00000408706 FXR2P51116 673 aaKnown RBP eCLIP7.09□□□□□ -1.27
U3.40-201ENST00000408706 PRR29P0C7W0 189 aa7.03□□□□□ -1.28
U3.40-201ENST00000408706 PRKAR2AP13861 404 aaKnown RBP7.01□□□□□ -1.29
U3.40-201ENST00000408706 STAG3Q9UJ98 1225 aa7□□□□□ -1.29
U3.40-201ENST00000408706 PROM2Q8N271 834 aa6.96□□□□□ -1.3
U3.40-201ENST00000408706 HAX1O00165 279 aa6.95□□□□□ -1.3
U3.40-201ENST00000408706 CHADLQ6NUI6 762 aa6.95□□□□□ -1.3
U3.40-201ENST00000408706 FKBP8Q14318 412 aa6.92□□□□□ -1.3
U3.40-201ENST00000408706 CREBZFQ9NS37 354 aa6.89□□□□□ -1.31
U3.40-201ENST00000408706 FARP1Q9Y4F1 1045 aaPredicted RBP6.89□□□□□ -1.31
U3.40-201ENST00000408706 SP7Q8TDD2 431 aaPredicted RBP6.87□□□□□ -1.31
U3.40-201ENST00000408706 C19orf67A6NJJ6 358 aa6.86□□□□□ -1.31
U3.40-201ENST00000408706 EVX2Q03828 476 aa6.86□□□□□ -1.31
U3.40-201ENST00000408706 CD44P16070 742 aaKnown RBP6.79□□□□□ -1.32
U3.40-201ENST00000408706 MNX1P50219 401 aaPredicted RBP6.79□□□□□ -1.32
U3.40-201ENST00000408706 MIER1Q8N108 512 aa6.79□□□□□ -1.32
U3.40-201ENST00000408706 NPM1P06748 294 aaKnown RBP eCLIP6.78□□□□□ -1.32
U3.40-201ENST00000408706 PLEKHG5O94827 1062 aa6.77□□□□□ -1.33
U3.40-201ENST00000408706 FBXO3Q9UK99 471 aa6.76□□□□□ -1.33
U3.40-201ENST00000408706 PLCD3Q8N3E9 789 aa6.75□□□□□ -1.33
U3.40-201ENST00000408706 ZRANB1Q9UGI0 708 aa6.73□□□□□ -1.33
U3.40-201ENST00000408706 GABBR2O75899 941 aa6.72□□□□□ -1.33
U3.40-201ENST00000408706 PAK3O75914 559 aaPredicted RBP6.72□□□□□ -1.33
U3.40-201ENST00000408706 CLCN6P51797 869 aa6.69□□□□□ -1.34
U3.40-201ENST00000408706 ZNF579Q8NAF0 562 aaKnown RBP6.69□□□□□ -1.34
U3.40-201ENST00000408706 ZBTB47Q9UFB7 747 aaPredicted RBP6.69□□□□□ -1.34
U3.40-201ENST00000408706 VASPP50552 380 aaPredicted RBP6.65□□□□□ -1.34
U3.40-201ENST00000408706 TSPYL2Q9H2G4 693 aaPredicted RBP6.65□□□□□ -1.34
U3.40-201ENST00000408706 PHF12Q96QT6 1004 aa6.64□□□□□ -1.35
U3.40-201ENST00000408706 RASEFQ8IZ41 740 aa6.63□□□□□ -1.35
U3.40-201ENST00000408706 NUBP1P53384 320 aa6.62□□□□□ -1.35
U3.40-201ENST00000408706 KLHL34Q8N239 644 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms