RNA–Protein interactions for RNA: ENST00000363399.1

RNU6-838P-201, Transcript of RNA, U6 small nuclear 838, pseudogene, humanhuman

BASIC

Gene RNU6-838P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-838P-201ENST00000363399 POTEDQ86YR6 584 aa7.96□□□□□ -1.14
RNU6-838P-201ENST00000363399 AEBP2Q6ZN18 517 aaPredicted RBP7□□□□□ -1.29
RNU6-838P-201ENST00000363399 CHIC1Q5VXU3 224 aa6.37□□□□□ -1.39
RNU6-838P-201ENST00000363399 SENP3Q9H4L4 574 aaPredicted RBP6.04□□□□□ -1.44
RNU6-838P-201ENST00000363399 POTEHQ6S545 545 aa5.97□□□□□ -1.45
RNU6-838P-201ENST00000363399 MSH5O43196 834 aa5.87□□□□□ -1.47
RNU6-838P-201ENST00000363399 CACNB1Q02641 598 aaPredicted RBP5.87□□□□□ -1.47
RNU6-838P-201ENST00000363399 FOXD1Q16676 465 aa5.87□□□□□ -1.47
RNU6-838P-201ENST00000363399 PHF23Q9BUL5 403 aaPredicted RBP5.85□□□□□ -1.47
RNU6-838P-201ENST00000363399 PLSCR2Q9NRY7 297 aa5.51□□□□□ -1.53
RNU6-838P-201ENST00000363399 PIAS4Q8N2W9 510 aaPredicted RBP5.15□□□□□ -1.59
RNU6-838P-201ENST00000363399 SP7Q8TDD2 431 aaPredicted RBP5□□□□□ -1.61
RNU6-838P-201ENST00000363399 RNF39Q9H2S5 420 aa4.94□□□□□ -1.62
RNU6-838P-201ENST00000363399 C1QBPQ07021 282 aaKnown RBP4.75□□□□□ -1.65
RNU6-838P-201ENST00000363399 LHX8Q68G74 356 aa4.68□□□□□ -1.66
RNU6-838P-201ENST00000363399 DMRT2Q9Y5R5 561 aa4.61□□□□□ -1.67
RNU6-838P-201ENST00000363399 PPP6R1Q9UPN7 881 aa4.58□□□□□ -1.68
RNU6-838P-201ENST00000363399 DCAF8L1A6NGE4 600 aa4.55□□□□□ -1.68
RNU6-838P-201ENST00000363399 MAPK8IP2Q13387 824 aaPredicted RBP4.52□□□□□ -1.69
RNU6-838P-201ENST00000363399 POTEMA6NI47 508 aa4.5□□□□□ -1.69
RNU6-838P-201ENST00000363399 ADRA2BP18089 450 aa4.48□□□□□ -1.69
RNU6-838P-201ENST00000363399 CHRDL2Q6WN34 429 aa4.46□□□□□ -1.7
RNU6-838P-201ENST00000363399 POTEGQ6S5H5 508 aa4.43□□□□□ -1.7
RNU6-838P-201ENST00000363399 HAX1O00165 279 aa4.37□□□□□ -1.71
RNU6-838P-201ENST00000363399 PCDH10Q9P2E7 1040 aa4.37□□□□□ -1.71
RNU6-838P-201ENST00000363399 EVX2Q03828 476 aa4.3□□□□□ -1.72
RNU6-838P-201ENST00000363399 DSG3P32926 999 aa4.23□□□□□ -1.73
RNU6-838P-201ENST00000363399 PIP4P2Q8N4L2 257 aa4.11□□□□□ -1.75
RNU6-838P-201ENST00000363399 OTUD5Q96G74 571 aa4.07□□□□□ -1.76
RNU6-838P-201ENST00000363399 GABBR2O75899 941 aa4.06□□□□□ -1.76
RNU6-838P-201ENST00000363399 POTEIP0CG38 1075 aa4.01□□□□□ -1.77
RNU6-838P-201ENST00000363399 MMRN1Q13201 1228 aa4.01□□□□□ -1.77
RNU6-838P-201ENST00000363399 LCE2DQ5TA82 110 aaPredicted RBP4□□□□□ -1.77
RNU6-838P-201ENST00000363399 RBM42Q9BTD8 480 aaKnown RBP3.97□□□□□ -1.77
RNU6-838P-201ENST00000363399 DNAJC5BQ9UF47 199 aa3.97□□□□□ -1.77
RNU6-838P-201ENST00000363399 CAPN15O75808 1086 aa3.96□□□□□ -1.78
RNU6-838P-201ENST00000363399 HOXD11P31277 338 aaPredicted RBP3.95□□□□□ -1.78
RNU6-838P-201ENST00000363399 CDAN1Q8IWY9 1227 aa3.95□□□□□ -1.78
RNU6-838P-201ENST00000363399 SPINK5Q9NQ38 1064 aaPredicted RBP3.95□□□□□ -1.78
RNU6-838P-201ENST00000363399 SCAF1Q9H7N4 1312 aaKnown RBP3.95□□□□□ -1.78
RNU6-838P-201ENST00000363399 SPNS2Q8IVW8 549 aa3.88□□□□□ -1.79
RNU6-838P-201ENST00000363399 FAM163AQ96GL9 167 aaPredicted RBP3.88□□□□□ -1.79
RNU6-838P-201ENST00000363399 POTEB2H3BUK9 544 aa3.87□□□□□ -1.79
RNU6-838P-201ENST00000363399 FXR2P51116 673 aaKnown RBP eCLIP3.85□□□□□ -1.79
RNU6-838P-201ENST00000363399 ABCB7O75027 752 aa3.81□□□□□ -1.8
RNU6-838P-201ENST00000363399 C19orf67A6NJJ6 358 aa3.78□□□□□ -1.8
RNU6-838P-201ENST00000363399 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.78□□□□□ -1.8
RNU6-838P-201ENST00000363399 LOC100996750A0A140TA64 210 aa3.74□□□□□ -1.81
RNU6-838P-201ENST00000363399 KRTAP4-6Q9BYQ5 205 aa3.74□□□□□ -1.81
RNU6-838P-201ENST00000363399 REM2Q8IYK8 340 aaPredicted RBP3.67□□□□□ -1.82
RNU6-838P-201ENST00000363399 PITPNM1O00562 1244 aa3.66□□□□□ -1.82
RNU6-838P-201ENST00000363399 PLPPR3Q6T4P5 718 aa3.66□□□□□ -1.82
RNU6-838P-201ENST00000363399 AKT1S1Q96B36 256 aa3.65□□□□□ -1.83
RNU6-838P-201ENST00000363399 DCBLD2Q96PD2 775 aa3.65□□□□□ -1.83
RNU6-838P-201ENST00000363399 TRHP20396 242 aaPredicted RBP3.62□□□□□ -1.83
RNU6-838P-201ENST00000363399 POTEJP0CG39 1038 aa3.59□□□□□ -1.83
RNU6-838P-201ENST00000363399 U3KPZ7 1027 aaPredicted RBP3.59□□□□□ -1.83
RNU6-838P-201ENST00000363399 RNF216Q9NWF9 866 aaPredicted RBP3.56□□□□□ -1.84
RNU6-838P-201ENST00000363399 PRKAR2AP13861 404 aaKnown RBP3.54□□□□□ -1.84
RNU6-838P-201ENST00000363399 MAMSTRQ6ZN01 415 aa3.47□□□□□ -1.85
RNU6-838P-201ENST00000363399 ZNF219Q9P2Y4 722 aaPredicted RBP3.46□□□□□ -1.86
RNU6-838P-201ENST00000363399 ST18O60284 1047 aa3.44□□□□□ -1.86
RNU6-838P-201ENST00000363399 CLCN6P51797 869 aa3.41□□□□□ -1.86
RNU6-838P-201ENST00000363399 SCUBE2Q9NQ36 999 aa3.41□□□□□ -1.86
RNU6-838P-201ENST00000363399 PELP1Q8IZL8 1130 aaKnown RBP3.4□□□□□ -1.87
RNU6-838P-201ENST00000363399 KRTAP3-3Q9BYR6 98 aa3.36□□□□□ -1.87
RNU6-838P-201ENST00000363399 KRTAP3-2Q9BYR7 98 aa3.36□□□□□ -1.87
RNU6-838P-201ENST00000363399 CD44P16070 742 aaKnown RBP3.34□□□□□ -1.87
RNU6-838P-201ENST00000363399 METRNQ9UJH8 293 aa3.34□□□□□ -1.87
RNU6-838P-201ENST00000363399 GALR2O43603 387 aaPredicted RBP3.33□□□□□ -1.88
RNU6-838P-201ENST00000363399 RNF166Q96A37 237 aaPredicted RBP3.33□□□□□ -1.88
RNU6-838P-201ENST00000363399 CHADLQ6NUI6 762 aa3.3□□□□□ -1.88
RNU6-838P-201ENST00000363399 CNKSR2Q8WXI2 1034 aa3.28□□□□□ -1.88
RNU6-838P-201ENST00000363399 MARVELD3Q96A59 401 aa3.28□□□□□ -1.88
RNU6-838P-201ENST00000363399 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.24□□□□□ -1.89
RNU6-838P-201ENST00000363399 IRX2Q9BZI1 471 aaPredicted RBP3.24□□□□□ -1.89
RNU6-838P-201ENST00000363399 KRTAP17-1Q9BYP8 105 aa3.23□□□□□ -1.89
RNU6-838P-201ENST00000363399 C7P10643 843 aa3.22□□□□□ -1.89
RNU6-838P-201ENST00000363399 POLA2Q14181 598 aa3.22□□□□□ -1.89
RNU6-838P-201ENST00000363399 KRTAP1-3Q8IUG1 177 aa3.22□□□□□ -1.89
RNU6-838P-201ENST00000363399 SUZ12Q15022 739 aaKnown RBP3.21□□□□□ -1.9
RNU6-838P-201ENST00000363399 SLC39A7Q92504 469 aa3.21□□□□□ -1.9
RNU6-838P-201ENST00000363399 KRTAP4-8Q9BYQ9 185 aa3.21□□□□□ -1.9
RNU6-838P-201ENST00000363399 KRTAP9-6A0A140TA67 174 aa3.2□□□□□ -1.9
RNU6-838P-201ENST00000363399 POTEB3A0JP26 581 aa3.2□□□□□ -1.9
RNU6-838P-201ENST00000363399 POTEBQ6S5H4 581 aa3.2□□□□□ -1.9
RNU6-838P-201ENST00000363399 ZNF579Q8NAF0 562 aaKnown RBP3.2□□□□□ -1.9
RNU6-838P-201ENST00000363399 TMEM121BQ9BXQ6 578 aaPredicted RBP3.2□□□□□ -1.9
RNU6-838P-201ENST00000363399 APLP2Q06481 763 aa3.19□□□□□ -1.9
RNU6-838P-201ENST00000363399 KRTAP9-2Q9BYQ4 174 aa3.19□□□□□ -1.9
RNU6-838P-201ENST00000363399 PLA2G2EQ9NZK7 142 aa3.19□□□□□ -1.9
RNU6-838P-201ENST00000363399 CLEC11AQ9Y240 323 aa3.18□□□□□ -1.9
RNU6-838P-201ENST00000363399 OSCARQ8IYS5 282 aa3.17□□□□□ -1.9
RNU6-838P-201ENST00000363399 MYT1LQ9UL68 1186 aa3.16□□□□□ -1.9
RNU6-838P-201ENST00000363399 POTEFA5A3E0 1075 aa3.15□□□□□ -1.91
RNU6-838P-201ENST00000363399 HS3ST6Q96QI5 342 aa3.13□□□□□ -1.91
RNU6-838P-201ENST00000363399 Q6ZNB5 142 aa3.12□□□□□ -1.91
RNU6-838P-201ENST00000363399 SLAIN1Q8ND83 568 aa3.12□□□□□ -1.91
RNU6-838P-201ENST00000363399 ZRANB1Q9UGI0 708 aa3.12□□□□□ -1.91
RNU6-838P-201ENST00000363399 ASTLQ6HA08 431 aaPredicted RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms