Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CLCA3PQ9Y6N3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CLCA3PQ9Y6N3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLCA3PQ9Y6N3 AL353807.1-201ENST00000427475 662 ntBASIC18.27■□□□□ 0.52
CLCA3PQ9Y6N3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLCA3PQ9Y6N3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.27■□□□□ 0.52
CLCA3PQ9Y6N3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CLCA3PQ9Y6N3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CLCA3PQ9Y6N3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCA3PQ9Y6N3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.27■□□□□ 0.52
CLCA3PQ9Y6N3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLCA3PQ9Y6N3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLCA3PQ9Y6N3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CLCA3PQ9Y6N3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLCA3PQ9Y6N3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CLCA3PQ9Y6N3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLCA3PQ9Y6N3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
CLCA3PQ9Y6N3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCA3PQ9Y6N3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCA3PQ9Y6N3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCA3PQ9Y6N3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCA3PQ9Y6N3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CLCA3PQ9Y6N3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCA3PQ9Y6N3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCA3PQ9Y6N3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCA3PQ9Y6N3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCA3PQ9Y6N3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.26■□□□□ 0.51
CLCA3PQ9Y6N3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCA3PQ9Y6N3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CLCA3PQ9Y6N3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCA3PQ9Y6N3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CLCA3PQ9Y6N3 AC093827.2-201ENST00000512654 315 ntBASIC18.26■□□□□ 0.51
CLCA3PQ9Y6N3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.26■□□□□ 0.51
CLCA3PQ9Y6N3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.26■□□□□ 0.51
CLCA3PQ9Y6N3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCA3PQ9Y6N3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.26■□□□□ 0.51
CLCA3PQ9Y6N3 AP001412.1-201ENST00000608405 714 ntBASIC18.26■□□□□ 0.51
CLCA3PQ9Y6N3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
CLCA3PQ9Y6N3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCA3PQ9Y6N3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLCA3PQ9Y6N3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CLCA3PQ9Y6N3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CLCA3PQ9Y6N3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCA3PQ9Y6N3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
CLCA3PQ9Y6N3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.26■□□□□ 0.51
CLCA3PQ9Y6N3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CLCA3PQ9Y6N3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 RPS2P4-201ENST00000476944 856 ntBASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 AP002982.1-201ENST00000492365 877 ntBASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.25■□□□□ 0.51
CLCA3PQ9Y6N3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 RPS2P55-201ENST00000397318 883 ntBASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 AC107956.1-201ENST00000494359 873 ntBASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms