Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
SPG7Q9UQ90 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
SPG7Q9UQ90 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC25.3■■□□□ 1.64
SPG7Q9UQ90 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SPG7Q9UQ90 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
SPG7Q9UQ90 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
SPG7Q9UQ90 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
SPG7Q9UQ90 AC009947.2-201ENST00000444014 672 ntBASIC25.3■■□□□ 1.64
SPG7Q9UQ90 AL671277.2-201ENST00000458060 996 ntBASIC25.3■■□□□ 1.64
SPG7Q9UQ90 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC25.3■■□□□ 1.64
SPG7Q9UQ90 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC25.3■■□□□ 1.64
SPG7Q9UQ90 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SPG7Q9UQ90 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC25.3■■□□□ 1.64
SPG7Q9UQ90 ETFA-216ENST00000560726 942 ntTSL 3 BASIC25.3■■□□□ 1.64
SPG7Q9UQ90 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC25.3■■□□□ 1.64
SPG7Q9UQ90 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
SPG7Q9UQ90 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SPG7Q9UQ90 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC25.3■■□□□ 1.64
SPG7Q9UQ90 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SPG7Q9UQ90 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SPG7Q9UQ90 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC25.3■■□□□ 1.64
SPG7Q9UQ90 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC25.3■■□□□ 1.64
SPG7Q9UQ90 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SPG7Q9UQ90 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SPG7Q9UQ90 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
SPG7Q9UQ90 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
SPG7Q9UQ90 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SPG7Q9UQ90 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SPG7Q9UQ90 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC25.29■■□□□ 1.64
SPG7Q9UQ90 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC25.29■■□□□ 1.64
SPG7Q9UQ90 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
SPG7Q9UQ90 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SPG7Q9UQ90 AP005212.1-201ENST00000581547 1997 ntBASIC25.29■■□□□ 1.64
SPG7Q9UQ90 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SPG7Q9UQ90 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SPG7Q9UQ90 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
SPG7Q9UQ90 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
SPG7Q9UQ90 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SPG7Q9UQ90 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC25.28■■□□□ 1.64
SPG7Q9UQ90 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
SPG7Q9UQ90 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SPG7Q9UQ90 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SPG7Q9UQ90 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC25.28■■□□□ 1.64
SPG7Q9UQ90 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC25.28■■□□□ 1.64
SPG7Q9UQ90 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC25.28■■□□□ 1.64
SPG7Q9UQ90 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC25.28■■□□□ 1.64
SPG7Q9UQ90 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SPG7Q9UQ90 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC25.28■■□□□ 1.64
SPG7Q9UQ90 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SPG7Q9UQ90 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SPG7Q9UQ90 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SPG7Q9UQ90 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SPG7Q9UQ90 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
SPG7Q9UQ90 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC25.28■■□□□ 1.64
SPG7Q9UQ90 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SPG7Q9UQ90 AL162377.1-201ENST00000618844 1793 ntBASIC25.28■■□□□ 1.64
SPG7Q9UQ90 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SPG7Q9UQ90 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
SPG7Q9UQ90 AP000523.1-201ENST00000398242 1049 ntBASIC25.27■■□□□ 1.64
SPG7Q9UQ90 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SPG7Q9UQ90 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC25.27■■□□□ 1.64
SPG7Q9UQ90 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC25.27■■□□□ 1.64
SPG7Q9UQ90 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC25.27■■□□□ 1.64
SPG7Q9UQ90 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC25.27■■□□□ 1.64
SPG7Q9UQ90 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC25.27■■□□□ 1.64
SPG7Q9UQ90 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SPG7Q9UQ90 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
SPG7Q9UQ90 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC25.27■■□□□ 1.64
SPG7Q9UQ90 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC25.27■■□□□ 1.64
SPG7Q9UQ90 IER3-202ENST00000376377 1350 ntBASIC25.27■■□□□ 1.64
SPG7Q9UQ90 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SPG7Q9UQ90 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC25.27■■□□□ 1.64
SPG7Q9UQ90 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC25.27■■□□□ 1.64
SPG7Q9UQ90 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
SPG7Q9UQ90 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SPG7Q9UQ90 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SPG7Q9UQ90 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC25.26■■□□□ 1.63
SPG7Q9UQ90 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SPG7Q9UQ90 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SPG7Q9UQ90 Telomerase-vert.1-201ENST00000363312 438 ntBASIC25.26■■□□□ 1.63
SPG7Q9UQ90 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
SPG7Q9UQ90 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
SPG7Q9UQ90 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SPG7Q9UQ90 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SPG7Q9UQ90 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC25.26■■□□□ 1.63
SPG7Q9UQ90 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SPG7Q9UQ90 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC25.26■■□□□ 1.63
SPG7Q9UQ90 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC25.25■■□□□ 1.63
SPG7Q9UQ90 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC25.25■■□□□ 1.63
SPG7Q9UQ90 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SPG7Q9UQ90 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SPG7Q9UQ90 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SPG7Q9UQ90 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SPG7Q9UQ90 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SPG7Q9UQ90 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC25.25■■□□□ 1.63
SPG7Q9UQ90 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SPG7Q9UQ90 KRT18P38-201ENST00000449496 1282 ntBASIC25.25■■□□□ 1.63
SPG7Q9UQ90 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC25.25■■□□□ 1.63
SPG7Q9UQ90 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC25.25■■□□□ 1.63
SPG7Q9UQ90 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms