Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHGB4Q9UN71 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB4Q9UN71 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB4Q9UN71 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB4Q9UN71 LSM12P1-201ENST00000411836 588 ntBASIC18.72■□□□□ 0.59
PCDHGB4Q9UN71 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
PCDHGB4Q9UN71 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PCDHGB4Q9UN71 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDHGB4Q9UN71 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHGB4Q9UN71 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGB4Q9UN71 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
PCDHGB4Q9UN71 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
PCDHGB4Q9UN71 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGB4Q9UN71 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB4Q9UN71 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB4Q9UN71 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCDHGB4Q9UN71 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PCDHGB4Q9UN71 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGB4Q9UN71 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB4Q9UN71 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PCDHGB4Q9UN71 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 PHGDH-210ENST00000641115 1638 ntBASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 AC022517.1-201ENST00000592429 346 ntBASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PCDHGB4Q9UN71 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PCDHGB4Q9UN71 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB4Q9UN71 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB4Q9UN71 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHGB4Q9UN71 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB4Q9UN71 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB4Q9UN71 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGB4Q9UN71 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB4Q9UN71 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PCDHGB4Q9UN71 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB4Q9UN71 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB4Q9UN71 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PCDHGB4Q9UN71 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB4Q9UN71 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGB4Q9UN71 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGB4Q9UN71 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDHGB4Q9UN71 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB4Q9UN71 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB4Q9UN71 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB4Q9UN71 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
PCDHGB4Q9UN71 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB4Q9UN71 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB4Q9UN71 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB4Q9UN71 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB4Q9UN71 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB4Q9UN71 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB4Q9UN71 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB4Q9UN71 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGB4Q9UN71 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHGB4Q9UN71 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB4Q9UN71 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
PCDHGB4Q9UN71 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB4Q9UN71 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB4Q9UN71 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PCDHGB4Q9UN71 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB4Q9UN71 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB4Q9UN71 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB4Q9UN71 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB4Q9UN71 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB4Q9UN71 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB4Q9UN71 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB4Q9UN71 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB4Q9UN71 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHGB4Q9UN71 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHGB4Q9UN71 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHGB4Q9UN71 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHGB4Q9UN71 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGB4Q9UN71 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms