Protein–RNA interactions for Protein: Q9NY27

PPP4R2, Serine/threonine-protein phosphatase 4 regulatory subunit 2, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R2Q9NY27 IRX1P1-201ENST00000438849 1838 ntBASIC24.79■■□□□ 1.56
PPP4R2Q9NY27 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PPP4R2Q9NY27 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PPP4R2Q9NY27 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
PPP4R2Q9NY27 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC24.79■■□□□ 1.56
PPP4R2Q9NY27 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
PPP4R2Q9NY27 AC023632.3-201ENST00000521633 145 ntBASIC24.79■■□□□ 1.56
PPP4R2Q9NY27 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC24.79■■□□□ 1.56
PPP4R2Q9NY27 AC100791.3-201ENST00000617619 330 ntBASIC24.79■■□□□ 1.56
PPP4R2Q9NY27 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PPP4R2Q9NY27 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PPP4R2Q9NY27 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PPP4R2Q9NY27 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PPP4R2Q9NY27 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC24.79■■□□□ 1.56
PPP4R2Q9NY27 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PPP4R2Q9NY27 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
PPP4R2Q9NY27 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC24.79■■□□□ 1.56
PPP4R2Q9NY27 AC008406.3-201ENST00000620001 1374 ntBASIC24.79■■□□□ 1.56
PPP4R2Q9NY27 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC24.78■■□□□ 1.56
PPP4R2Q9NY27 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
PPP4R2Q9NY27 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PPP4R2Q9NY27 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
PPP4R2Q9NY27 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PPP4R2Q9NY27 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PPP4R2Q9NY27 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
PPP4R2Q9NY27 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PPP4R2Q9NY27 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PPP4R2Q9NY27 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC24.78■■□□□ 1.56
PPP4R2Q9NY27 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC24.78■■□□□ 1.56
PPP4R2Q9NY27 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PPP4R2Q9NY27 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
PPP4R2Q9NY27 GCK-205ENST00000437084 1385 ntTSL 5 BASIC24.78■■□□□ 1.56
PPP4R2Q9NY27 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
PPP4R2Q9NY27 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC24.77■■□□□ 1.56
PPP4R2Q9NY27 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC24.77■■□□□ 1.56
PPP4R2Q9NY27 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PPP4R2Q9NY27 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PPP4R2Q9NY27 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
PPP4R2Q9NY27 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PPP4R2Q9NY27 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PPP4R2Q9NY27 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PPP4R2Q9NY27 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PPP4R2Q9NY27 YBX1P1-201ENST00000445822 960 ntBASIC24.77■■□□□ 1.56
PPP4R2Q9NY27 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC24.77■■□□□ 1.56
PPP4R2Q9NY27 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
PPP4R2Q9NY27 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PPP4R2Q9NY27 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PPP4R2Q9NY27 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PPP4R2Q9NY27 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC24.77■■□□□ 1.56
PPP4R2Q9NY27 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC24.77■■□□□ 1.56
PPP4R2Q9NY27 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PPP4R2Q9NY27 AC067852.2-201ENST00000590513 2313 ntBASIC24.77■■□□□ 1.56
PPP4R2Q9NY27 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PPP4R2Q9NY27 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
PPP4R2Q9NY27 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PPP4R2Q9NY27 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC24.76■■□□□ 1.55
PPP4R2Q9NY27 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PPP4R2Q9NY27 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
PPP4R2Q9NY27 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.76■■□□□ 1.55
PPP4R2Q9NY27 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC24.76■■□□□ 1.55
PPP4R2Q9NY27 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PPP4R2Q9NY27 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PPP4R2Q9NY27 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PPP4R2Q9NY27 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
PPP4R2Q9NY27 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PPP4R2Q9NY27 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PPP4R2Q9NY27 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC24.76■■□□□ 1.55
PPP4R2Q9NY27 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PPP4R2Q9NY27 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
PPP4R2Q9NY27 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PPP4R2Q9NY27 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PPP4R2Q9NY27 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC24.75■■□□□ 1.55
PPP4R2Q9NY27 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PPP4R2Q9NY27 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PPP4R2Q9NY27 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
PPP4R2Q9NY27 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PPP4R2Q9NY27 AC010536.3-201ENST00000620306 533 ntBASIC24.75■■□□□ 1.55
PPP4R2Q9NY27 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.75■■□□□ 1.55
PPP4R2Q9NY27 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PPP4R2Q9NY27 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC24.75■■□□□ 1.55
PPP4R2Q9NY27 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
PPP4R2Q9NY27 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PPP4R2Q9NY27 AC116351.2-201ENST00000606540 1585 ntBASIC24.75■■□□□ 1.55
PPP4R2Q9NY27 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
PPP4R2Q9NY27 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PPP4R2Q9NY27 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PPP4R2Q9NY27 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PPP4R2Q9NY27 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
PPP4R2Q9NY27 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC24.74■■□□□ 1.55
PPP4R2Q9NY27 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PPP4R2Q9NY27 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PPP4R2Q9NY27 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PPP4R2Q9NY27 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.74■■□□□ 1.55
PPP4R2Q9NY27 KRT18P68-201ENST00000392293 1000 ntBASIC24.74■■□□□ 1.55
PPP4R2Q9NY27 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PPP4R2Q9NY27 AC131212.1-201ENST00000613771 668 ntBASIC24.74■■□□□ 1.55
PPP4R2Q9NY27 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PPP4R2Q9NY27 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PPP4R2Q9NY27 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PPP4R2Q9NY27 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms