Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 SDHAP1-207ENST00000440850 2000 ntBASIC21.11■□□□□ 0.97
KCNF1Q9H3M0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KCNF1Q9H3M0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KCNF1Q9H3M0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KCNF1Q9H3M0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.1■□□□□ 0.97
KCNF1Q9H3M0 AL136967.2-201ENST00000623968 743 ntBASIC21.1■□□□□ 0.97
KCNF1Q9H3M0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
KCNF1Q9H3M0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.1■□□□□ 0.97
KCNF1Q9H3M0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.1■□□□□ 0.97
KCNF1Q9H3M0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KCNF1Q9H3M0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KCNF1Q9H3M0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
KCNF1Q9H3M0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
KCNF1Q9H3M0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KCNF1Q9H3M0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KCNF1Q9H3M0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KCNF1Q9H3M0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KCNF1Q9H3M0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.1■□□□□ 0.97
KCNF1Q9H3M0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KCNF1Q9H3M0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
KCNF1Q9H3M0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
KCNF1Q9H3M0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.09■□□□□ 0.97
KCNF1Q9H3M0 ESPNP-201ENST00000270691 2015 ntBASIC21.09■□□□□ 0.97
KCNF1Q9H3M0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KCNF1Q9H3M0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
KCNF1Q9H3M0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KCNF1Q9H3M0 YBX1P1-201ENST00000445822 960 ntBASIC21.09■□□□□ 0.97
KCNF1Q9H3M0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KCNF1Q9H3M0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
KCNF1Q9H3M0 AL031432.3-201ENST00000607698 485 ntBASIC21.09■□□□□ 0.97
KCNF1Q9H3M0 AC106739.1-201ENST00000617035 715 ntBASIC21.09■□□□□ 0.97
KCNF1Q9H3M0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
KCNF1Q9H3M0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
KCNF1Q9H3M0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
KCNF1Q9H3M0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
KCNF1Q9H3M0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KCNF1Q9H3M0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
KCNF1Q9H3M0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KCNF1Q9H3M0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KCNF1Q9H3M0 MKRN4P-201ENST00000444706 1521 ntBASIC21.09■□□□□ 0.97
KCNF1Q9H3M0 AC106820.2-201ENST00000563775 3264 ntBASIC21.09■□□□□ 0.97
KCNF1Q9H3M0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
KCNF1Q9H3M0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
KCNF1Q9H3M0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
KCNF1Q9H3M0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
KCNF1Q9H3M0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
KCNF1Q9H3M0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KCNF1Q9H3M0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KCNF1Q9H3M0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
KCNF1Q9H3M0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.08■□□□□ 0.97
KCNF1Q9H3M0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
KCNF1Q9H3M0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KCNF1Q9H3M0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KCNF1Q9H3M0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.08■□□□□ 0.97
KCNF1Q9H3M0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.08■□□□□ 0.97
KCNF1Q9H3M0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
KCNF1Q9H3M0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KCNF1Q9H3M0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.08■□□□□ 0.97
KCNF1Q9H3M0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.08■□□□□ 0.97
KCNF1Q9H3M0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.08■□□□□ 0.97
KCNF1Q9H3M0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KCNF1Q9H3M0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
KCNF1Q9H3M0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
KCNF1Q9H3M0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC21.08■□□□□ 0.96
KCNF1Q9H3M0 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
KCNF1Q9H3M0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
KCNF1Q9H3M0 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.08■□□□□ 0.96
KCNF1Q9H3M0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
KCNF1Q9H3M0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.96
KCNF1Q9H3M0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.07■□□□□ 0.96
KCNF1Q9H3M0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KCNF1Q9H3M0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KCNF1Q9H3M0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KCNF1Q9H3M0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KCNF1Q9H3M0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC21.07■□□□□ 0.96
KCNF1Q9H3M0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KCNF1Q9H3M0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KCNF1Q9H3M0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KCNF1Q9H3M0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KCNF1Q9H3M0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.07■□□□□ 0.96
KCNF1Q9H3M0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
KCNF1Q9H3M0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC21.07■□□□□ 0.96
KCNF1Q9H3M0 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.07■□□□□ 0.96
KCNF1Q9H3M0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
KCNF1Q9H3M0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KCNF1Q9H3M0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KCNF1Q9H3M0 AC018553.1-201ENST00000616682 1458 ntBASIC21.07■□□□□ 0.96
KCNF1Q9H3M0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
KCNF1Q9H3M0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
KCNF1Q9H3M0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
KCNF1Q9H3M0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
KCNF1Q9H3M0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC21.06■□□□□ 0.96
KCNF1Q9H3M0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
KCNF1Q9H3M0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KCNF1Q9H3M0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
KCNF1Q9H3M0 AC009053.2-201ENST00000563701 2365 ntBASIC21.06■□□□□ 0.96
KCNF1Q9H3M0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.06■□□□□ 0.96
KCNF1Q9H3M0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
KCNF1Q9H3M0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
KCNF1Q9H3M0 HLA-G-202ENST00000376815 851 ntBASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms