Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 HIST1H2APS4-201ENST00000362070 348 ntBASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 WWOX-216ENST00000569818 525 ntBASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 FAM87A-204ENST00000613235 858 ntBASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 AC006011.2-201ENST00000621313 1158 ntBASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 AC131212.4-201ENST00000623606 975 ntBASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 KRT8P41-201ENST00000533985 1514 ntBASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 FSCN1P1-201ENST00000568912 1481 ntBASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC6.58□□□□□ -1.36
KRTAP4-3Q9BYR4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 AC007952.6-201ENST00000573168 2673 ntBASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 AC003957.1-201ENST00000625108 2673 ntBASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 LINC01521-201ENST00000504184 1943 ntBASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 ARMC10P1-201ENST00000313754 855 ntBASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 AC113347.1-201ENST00000413321 391 ntBASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 CD70-202ENST00000423145 881 ntTSL 2 BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 MFAP1P1-201ENST00000442257 1255 ntBASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
KRTAP4-3Q9BYR4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms