Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 DUX4L2-201ENST00000561772 1275 ntBASIC14.59□□□□□ -0.07
AP1S3Q96PC3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 DUX4L6-201ENST00000626483 1275 ntBASIC14.59□□□□□ -0.07
AP1S3Q96PC3 DUX4L1-201ENST00000627662 1275 ntBASIC14.59□□□□□ -0.07
AP1S3Q96PC3 DUX4L8-201ENST00000629013 1275 ntBASIC14.59□□□□□ -0.07
AP1S3Q96PC3 DUX4L3-201ENST00000630187 1275 ntBASIC14.59□□□□□ -0.07
AP1S3Q96PC3 DUX4L7-201ENST00000630678 1275 ntBASIC14.59□□□□□ -0.07
AP1S3Q96PC3 DUX4L5-201ENST00000630834 1275 ntBASIC14.59□□□□□ -0.07
AP1S3Q96PC3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.59□□□□□ -0.07
AP1S3Q96PC3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
AP1S3Q96PC3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.58□□□□□ -0.07
AP1S3Q96PC3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
AP1S3Q96PC3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
AP1S3Q96PC3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S3Q96PC3 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S3Q96PC3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.58□□□□□ -0.08
AP1S3Q96PC3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S3Q96PC3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
AP1S3Q96PC3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S3Q96PC3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC14.58□□□□□ -0.08
AP1S3Q96PC3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
AP1S3Q96PC3 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S3Q96PC3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S3Q96PC3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
AP1S3Q96PC3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S3Q96PC3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S3Q96PC3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC14.58□□□□□ -0.08
AP1S3Q96PC3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC14.58□□□□□ -0.08
AP1S3Q96PC3 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S3Q96PC3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S3Q96PC3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S3Q96PC3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC14.58□□□□□ -0.08
AP1S3Q96PC3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.58□□□□□ -0.08
AP1S3Q96PC3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.58□□□□□ -0.08
AP1S3Q96PC3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S3Q96PC3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S3Q96PC3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S3Q96PC3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC14.58□□□□□ -0.08
AP1S3Q96PC3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.58□□□□□ -0.08
AP1S3Q96PC3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP1S3Q96PC3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S3Q96PC3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
AP1S3Q96PC3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S3Q96PC3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.57□□□□□ -0.08
AP1S3Q96PC3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S3Q96PC3 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S3Q96PC3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC14.57□□□□□ -0.08
AP1S3Q96PC3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S3Q96PC3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S3Q96PC3 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S3Q96PC3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC14.57□□□□□ -0.08
AP1S3Q96PC3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S3Q96PC3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S3Q96PC3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S3Q96PC3 NME4-202ENST00000382940 766 ntTSL 3 BASIC14.57□□□□□ -0.08
AP1S3Q96PC3 AC007322.3-201ENST00000426526 701 ntBASIC14.57□□□□□ -0.08
AP1S3Q96PC3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S3Q96PC3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC14.57□□□□□ -0.08
AP1S3Q96PC3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC14.57□□□□□ -0.08
AP1S3Q96PC3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
AP1S3Q96PC3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S3Q96PC3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
AP1S3Q96PC3 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S3Q96PC3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
AP1S3Q96PC3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
AP1S3Q96PC3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S3Q96PC3 AL032819.2-201ENST00000624543 2162 ntBASIC14.57□□□□□ -0.08
AP1S3Q96PC3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S3Q96PC3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP1S3Q96PC3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.56□□□□□ -0.08
AP1S3Q96PC3 AL691432.2-201ENST00000607222 2038 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms