Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TNFRSF25Q93038 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC22.01■■□□□ 1.11
TNFRSF25Q93038 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TNFRSF25Q93038 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
TNFRSF25Q93038 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TNFRSF25Q93038 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TNFRSF25Q93038 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.01■■□□□ 1.11
TNFRSF25Q93038 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
TNFRSF25Q93038 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.01■■□□□ 1.11
TNFRSF25Q93038 AL353807.1-201ENST00000427475 662 ntBASIC22.01■■□□□ 1.11
TNFRSF25Q93038 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC22.01■■□□□ 1.11
TNFRSF25Q93038 AP002982.1-201ENST00000492365 877 ntBASIC22.01■■□□□ 1.11
TNFRSF25Q93038 GLRB-205ENST00000512619 728 ntTSL 3 BASIC22.01■■□□□ 1.11
TNFRSF25Q93038 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.01■■□□□ 1.11
TNFRSF25Q93038 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC22.01■■□□□ 1.11
TNFRSF25Q93038 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC22.01■■□□□ 1.11
TNFRSF25Q93038 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TNFRSF25Q93038 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TNFRSF25Q93038 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC22.01■■□□□ 1.11
TNFRSF25Q93038 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC22.01■■□□□ 1.11
TNFRSF25Q93038 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC22.01■■□□□ 1.11
TNFRSF25Q93038 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TNFRSF25Q93038 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
TNFRSF25Q93038 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC22■■□□□ 1.11
TNFRSF25Q93038 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC22■■□□□ 1.11
TNFRSF25Q93038 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC22■■□□□ 1.11
TNFRSF25Q93038 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TNFRSF25Q93038 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TNFRSF25Q93038 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC22■■□□□ 1.11
TNFRSF25Q93038 PTPA-216ENST00000432651 857 ntTSL 2 BASIC22■■□□□ 1.11
TNFRSF25Q93038 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
TNFRSF25Q93038 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC22■■□□□ 1.11
TNFRSF25Q93038 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TNFRSF25Q93038 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC22■■□□□ 1.11
TNFRSF25Q93038 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
TNFRSF25Q93038 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22■■□□□ 1.11
TNFRSF25Q93038 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.99■■□□□ 1.11
TNFRSF25Q93038 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TNFRSF25Q93038 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
TNFRSF25Q93038 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
TNFRSF25Q93038 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.99■■□□□ 1.11
TNFRSF25Q93038 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.99■■□□□ 1.11
TNFRSF25Q93038 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TNFRSF25Q93038 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
TNFRSF25Q93038 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.99■■□□□ 1.11
TNFRSF25Q93038 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.99■■□□□ 1.11
TNFRSF25Q93038 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.99■■□□□ 1.11
TNFRSF25Q93038 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.99■■□□□ 1.11
TNFRSF25Q93038 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.99■■□□□ 1.11
TNFRSF25Q93038 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.99■■□□□ 1.11
TNFRSF25Q93038 AC073195.1-201ENST00000607241 877 ntBASIC21.99■■□□□ 1.11
TNFRSF25Q93038 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.99■■□□□ 1.11
TNFRSF25Q93038 AL161938.1-201ENST00000569833 2180 ntBASIC21.99■■□□□ 1.11
TNFRSF25Q93038 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TNFRSF25Q93038 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TNFRSF25Q93038 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
TNFRSF25Q93038 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
TNFRSF25Q93038 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.99■■□□□ 1.11
TNFRSF25Q93038 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TNFRSF25Q93038 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
TNFRSF25Q93038 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TNFRSF25Q93038 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
TNFRSF25Q93038 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TNFRSF25Q93038 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TNFRSF25Q93038 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
TNFRSF25Q93038 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TNFRSF25Q93038 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
TNFRSF25Q93038 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.98■■□□□ 1.11
TNFRSF25Q93038 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
TNFRSF25Q93038 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
TNFRSF25Q93038 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.98■■□□□ 1.11
TNFRSF25Q93038 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.98■■□□□ 1.11
TNFRSF25Q93038 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
TNFRSF25Q93038 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.98■■□□□ 1.11
TNFRSF25Q93038 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TNFRSF25Q93038 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
TNFRSF25Q93038 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.98■■□□□ 1.11
TNFRSF25Q93038 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.98■■□□□ 1.11
TNFRSF25Q93038 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.98■■□□□ 1.11
TNFRSF25Q93038 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TNFRSF25Q93038 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TNFRSF25Q93038 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TNFRSF25Q93038 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
TNFRSF25Q93038 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.98■■□□□ 1.11
TNFRSF25Q93038 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
TNFRSF25Q93038 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
TNFRSF25Q93038 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TNFRSF25Q93038 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TNFRSF25Q93038 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TNFRSF25Q93038 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TNFRSF25Q93038 RPS2P55-201ENST00000397318 883 ntBASIC21.97■■□□□ 1.11
TNFRSF25Q93038 MESTP1-201ENST00000404287 994 ntBASIC21.97■■□□□ 1.11
TNFRSF25Q93038 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TNFRSF25Q93038 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TNFRSF25Q93038 AC107956.1-201ENST00000494359 873 ntBASIC21.97■■□□□ 1.11
TNFRSF25Q93038 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TNFRSF25Q93038 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.97■■□□□ 1.11
TNFRSF25Q93038 AC233702.5-201ENST00000584107 538 ntBASIC21.97■■□□□ 1.11
TNFRSF25Q93038 Z99916.2-201ENST00000604037 246 ntBASIC21.97■■□□□ 1.11
TNFRSF25Q93038 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms