Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17■□□□□ 0.31
DNAAF1Q8NEP3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
DNAAF1Q8NEP3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17■□□□□ 0.31
DNAAF1Q8NEP3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17■□□□□ 0.31
DNAAF1Q8NEP3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17■□□□□ 0.31
DNAAF1Q8NEP3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DNAAF1Q8NEP3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
DNAAF1Q8NEP3 AC133552.2-202ENST00000575694 574 ntBASIC17■□□□□ 0.31
DNAAF1Q8NEP3 AC022517.1-201ENST00000592429 346 ntBASIC17■□□□□ 0.31
DNAAF1Q8NEP3 AC005181.1-201ENST00000604782 1256 ntBASIC17■□□□□ 0.31
DNAAF1Q8NEP3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17■□□□□ 0.31
DNAAF1Q8NEP3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
DNAAF1Q8NEP3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DNAAF1Q8NEP3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17■□□□□ 0.31
DNAAF1Q8NEP3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DNAAF1Q8NEP3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DNAAF1Q8NEP3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
DNAAF1Q8NEP3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
DNAAF1Q8NEP3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DNAAF1Q8NEP3 CROCCP3-202ENST00000420820 1947 ntBASIC17■□□□□ 0.31
DNAAF1Q8NEP3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.99■□□□□ 0.31
DNAAF1Q8NEP3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DNAAF1Q8NEP3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.99■□□□□ 0.31
DNAAF1Q8NEP3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
DNAAF1Q8NEP3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
DNAAF1Q8NEP3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.99■□□□□ 0.31
DNAAF1Q8NEP3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
DNAAF1Q8NEP3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DNAAF1Q8NEP3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DNAAF1Q8NEP3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DNAAF1Q8NEP3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.99■□□□□ 0.31
DNAAF1Q8NEP3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
DNAAF1Q8NEP3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
DNAAF1Q8NEP3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.99■□□□□ 0.31
DNAAF1Q8NEP3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.99■□□□□ 0.31
DNAAF1Q8NEP3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.99■□□□□ 0.31
DNAAF1Q8NEP3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DNAAF1Q8NEP3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.99■□□□□ 0.31
DNAAF1Q8NEP3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DNAAF1Q8NEP3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.99■□□□□ 0.31
DNAAF1Q8NEP3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.99■□□□□ 0.31
DNAAF1Q8NEP3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DNAAF1Q8NEP3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 AL161938.1-201ENST00000569833 2180 ntBASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.98■□□□□ 0.31
DNAAF1Q8NEP3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms